RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 KDM2BQ8NHM5 1336 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 ECE1P42892 770 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 PCOLCEQ15113 449 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 LONRF2Q1L5Z9 754 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 TRIM68Q6AZZ1 485 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 MAMDC4Q6UXC1 1216 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 OTOP2Q7RTS6 562 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 MENTQ9BUN1 341 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 TANGO6Q9C0B7 1094 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 NDOR1Q9UHB4 597 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 COQ6Q9Y2Z9 468 aa6.34□□□□□ -1.39
SCFD1-217ENST00000555953 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-217ENST00000555953 SCDO00767 359 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 RASGRP1O95267 797 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 ATP2B1P20020 1258 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 DGCR2P98153 550 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 SERINC3Q13530 473 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 RASA3Q14644 834 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 TMEM200BQ69YZ2 307 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 USP30Q70CQ3 517 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 FILIP1Q7Z7B0 1213 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 GSTCDQ8NEC7 633 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 ASB15Q8WXK1 588 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 OR10A5Q9H207 317 aa6.33□□□□□ -1.4
SCFD1-217ENST00000555953 PUF60Q9UHX1 559 aaKnown RBP6.33□□□□□ -1.4
SCFD1-217ENST00000555953 A0A0G2JNJ9 132 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 FAM221BA6H8Z2 402 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 RASSF10A6NK89 507 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 MRE11P49959 708 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 ZNF808Q8N4W9 903 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-217ENST00000555953 SLC7A14Q8TBB6 771 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 FAM89AQ96GI7 184 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 OR10A2Q9H208 303 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 SLITRK6Q9H5Y7 841 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 KCNH7Q9NS40 1196 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 Q9UFV3 132 aa6.32□□□□□ -1.4
SCFD1-217ENST00000555953 OVOL3O00110 214 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
SCFD1-217ENST00000555953 PTH1RQ03431 593 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 HGFACQ04756 655 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 FOXL1Q12952 345 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 MOGSQ13724 837 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 GPR135Q8IZ08 494 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 RTKN2Q8IZC4 609 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 OR14K1Q8NGZ2 314 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 WDR48Q8TAF3 677 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 SCLYQ96I15 445 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 GBP4Q96PP9 640 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 DEPDC7Q96QD5 511 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 CELF4Q9BZC1 486 aaKnown RBP6.31□□□□□ -1.4
SCFD1-217ENST00000555953 CSRNP2Q9H175 543 aa6.31□□□□□ -1.4
SCFD1-217ENST00000555953 PRAMEF22A3QJZ6 481 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 FOXP2O15409 715 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 NARSO43776 548 aaKnown RBP6.3□□□□□ -1.4
SCFD1-217ENST00000555953 ZNF202O95125 648 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 MSX2P35548 267 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-217ENST00000555953 MEOX1P50221 254 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 STAT5BP51692 787 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 FHL2Q14192 279 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 TRIM61Q5EBN2 209 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 OVCH1Q7RTY7 1134 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 C1orf210Q8IVY1 113 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 IL17DQ8TAD2 202 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 DLG3Q92796 817 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 MSL2Q9HCI7 577 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 SNTG2Q9NY99 539 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 PLA2G3Q9NZ20 509 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 B3GALT1Q9Y5Z6 326 aa6.3□□□□□ -1.4
SCFD1-217ENST00000555953 E9PSI1 815 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 EFCAB14O75071 495 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 C1SP09871 688 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 ACRV1P26436 265 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
SCFD1-217ENST00000555953 ZC3H12BQ5HYM0 836 aaKnown RBP6.29□□□□□ -1.4
SCFD1-217ENST00000555953 CRB2Q5IJ48 1285 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 GRAMD4Q6IC98 578 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 HIPK4Q8NE63 616 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 MAGEB10Q96LZ2 347 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-217ENST00000555953 ASB1Q9Y576 335 aa6.29□□□□□ -1.4
SCFD1-217ENST00000555953 KCNA6P17658 529 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 SDHAP31040 664 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 LSM12Q3MHD2 195 aaKnown RBP6.28□□□□□ -1.4
SCFD1-217ENST00000555953 CATSPEREQ5SY80 951 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 ABHD17CQ6PCB6 329 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 LRP10Q7Z4F1 713 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 BCL6BQ8N143 479 aaPredicted RBP6.28□□□□□ -1.4
SCFD1-217ENST00000555953 CACTINQ8WUQ7 758 aaKnown RBP6.28□□□□□ -1.4
SCFD1-217ENST00000555953 AGO3Q9H9G7 860 aaKnown RBP6.28□□□□□ -1.4
SCFD1-217ENST00000555953 TLR9Q9NR96 1032 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 SFMBT1Q9UHJ3 866 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 FAM184BQ9ULE4 1060 aa6.28□□□□□ -1.4
SCFD1-217ENST00000555953 SLC12A8A0AV02 714 aa6.27□□□□□ -1.41
SCFD1-217ENST00000555953 GOLGA6L22H0YM25 854 aa6.27□□□□□ -1.41
SCFD1-217ENST00000555953 TMEM132BQ14DG7 1078 aa6.27□□□□□ -1.41
SCFD1-217ENST00000555953 BRAPQ7Z569 592 aa6.27□□□□□ -1.41
SCFD1-217ENST00000555953 FGD2Q7Z6J4 655 aa6.27□□□□□ -1.41
SCFD1-217ENST00000555953 DNAJC7Q99615 494 aa6.27□□□□□ -1.41
SCFD1-217ENST00000555953 HIRIP3Q9BW71 556 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-217ENST00000555953 NELFAQ9H3P2 528 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms