RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.1■■□□□ 1.29
VTI1B-205ENST00000555543 LCHNA4D1U4 455 aa23.1■■□□□ 1.29
VTI1B-205ENST00000555543 ST18O60284 1047 aa23.1■■□□□ 1.29
VTI1B-205ENST00000555543 GJB5O95377 273 aa23.1■■□□□ 1.29
VTI1B-205ENST00000555543 RPLP2P05387 115 aaKnown RBP23.1■■□□□ 1.29
VTI1B-205ENST00000555543 HMGN5P82970 282 aaKnown RBP23.1■■□□□ 1.29
VTI1B-205ENST00000555543 PPP2R5CQ13362 524 aa23.1■■□□□ 1.29
VTI1B-205ENST00000555543 FAM20AQ96MK3 541 aa23.1■■□□□ 1.29
VTI1B-205ENST00000555543 AGO3Q9H9G7 860 aaKnown RBP23.1■■□□□ 1.29
VTI1B-205ENST00000555543 TRPV2Q9Y5S1 764 aa23.1■■□□□ 1.29
VTI1B-205ENST00000555543 TBX3O15119 743 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 TLL1O43897 1013 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 FOSL2P15408 326 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 IER5Q5VY09 327 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 FAM117BQ6P1L5 589 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 TSHZ1Q6ZSZ6 1077 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 SPRED2Q7Z698 418 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 MYOCDQ8IZQ8 938 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 APBB2Q92870 758 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 PRUNE2Q8WUY3 3088 aa23.09■■□□□ 1.29
VTI1B-205ENST00000555543 EVPLQ92817 2033 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 TMEM150BA6NC51 233 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 KIF28PB7ZC32 967 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 STBD1O95210 358 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 TAP1Q03518 808 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 NME8Q8N427 588 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 BANK1Q8NDB2 785 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 ZBED2Q9BTP6 218 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 CELF4Q9BZC1 486 aaKnown RBP23.08■■□□□ 1.29
VTI1B-205ENST00000555543 CEP131Q9UPN4 1083 aa23.08■■□□□ 1.29
VTI1B-205ENST00000555543 KDM3AQ9Y4C1 1321 aa23.08■■□□□ 1.28
VTI1B-205ENST00000555543 M0QZ92 97 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 AMHP03971 560 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 CD52P31358 61 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 CLCN3P51790 818 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 SPIRE1Q08AE8 756 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 LINC01465Q8N7H1 131 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 FBXO18Q8NFZ0 1043 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 TMX3Q96JJ7 454 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 PPP1R16BQ96T49 567 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 CDHR5Q9HBB8 845 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 NRBP2Q9NSY0 501 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 LOXHD1Q8IVV2 1947 aa23.07■■□□□ 1.28
VTI1B-205ENST00000555543 ADGRE1Q14246 886 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 SAFBQ15424 915 aaKnown RBP eCLIP23.06■■□□□ 1.28
VTI1B-205ENST00000555543 TARBP2Q15633 366 aaKnown RBP23.06■■□□□ 1.28
VTI1B-205ENST00000555543 LRRC71Q8N4P6 559 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 METTL13Q8N6R0 699 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 FAM184AQ8NB25 1140 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 LINC01599Q8WXQ3 324 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 RAD9AQ99638 391 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 CERS4Q9HA82 394 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 SEPT9Q9UHD8 586 aaPredicted RBP23.06■■□□□ 1.28
VTI1B-205ENST00000555543 MYO9BQ13459 2157 aa23.06■■□□□ 1.28
VTI1B-205ENST00000555543 EPOPA6NHQ4 379 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 MARCH6O60337 910 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 VTNP04004 478 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 SLFN12Q8IYM2 578 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 TMEM40Q8WWA1 233 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 CEP89Q96ST8 783 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 SH2D3AQ9BRG2 576 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 WRAP73Q9P2S5 460 aaPredicted RBP23.05■■□□□ 1.28
VTI1B-205ENST00000555543 GINS2Q9Y248 185 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 SQORQ9Y6N5 450 aa23.05■■□□□ 1.28
VTI1B-205ENST00000555543 MAGEB2O15479 319 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 NEMFO60524 1076 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 PSMC5P62195 406 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 CALCRLQ16602 461 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 KIZQ2M2Z5 673 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 TMEM266Q2M3C6 531 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 XKR3Q5GH77 459 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 NCAPH2Q6IBW4 605 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 EFCAB12Q6NXP0 572 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 MAFAQ8NHW3 353 aaPredicted RBP23.04■■□□□ 1.28
VTI1B-205ENST00000555543 TOP1MTQ969P6 601 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 NIFKQ9BYG3 293 aaKnown RBP23.04■■□□□ 1.28
VTI1B-205ENST00000555543 BACH2Q9BYV9 841 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 FOXP1Q9H334 677 aaPredicted RBP23.04■■□□□ 1.28
VTI1B-205ENST00000555543 PADI3Q9ULW8 664 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 UNC80Q8N2C7 3258 aa23.04■■□□□ 1.28
VTI1B-205ENST00000555543 UPP2O95045 317 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 BAG4O95429 457 aaKnown RBP23.03■■□□□ 1.28
VTI1B-205ENST00000555543 ATP2B1P20020 1258 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 HTRA4P83105 476 aaPredicted RBP23.03■■□□□ 1.28
VTI1B-205ENST00000555543 PAK2Q13177 524 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 MTERF2Q49AM1 385 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 ANO5Q75V66 913 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 USP38Q8NB14 1042 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 MTMR9Q96QG7 549 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 TMEM60Q9H2L4 133 aa23.03■■□□□ 1.28
VTI1B-205ENST00000555543 RFXAPO00287 272 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 ENPP3O14638 875 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 GPR32O75388 356 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 QARSP47897 775 aaKnown RBP23.02■■□□□ 1.28
VTI1B-205ENST00000555543 TBC1D8BQ0IIM8 1120 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 DRP2Q13474 957 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 EPHA7Q15375 998 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 PLA2G4FQ68DD2 849 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 IL27Q8NEV9 243 aa23.02■■□□□ 1.28
VTI1B-205ENST00000555543 GAS2L1Q99501 681 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms