RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 HOXD10P28358 340 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 MORC3Q14149 939 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 GIT2Q14161 759 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 SMAP1Q8IYB5 467 aaPredicted RBP11.3□□□□□ -0.6
NEK9-205ENST00000555405 GIMAP8Q8ND71 665 aaPredicted RBP11.3□□□□□ -0.6
NEK9-205ENST00000555405 SH3TC2Q8TF17 1288 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 GPR20Q99678 358 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 ADGRA2Q96PE1 1338 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 SYNGAP1Q96PV0 1343 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 FKTNO75072 461 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 SERPINC1P01008 464 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 PRKAR2AP13861 404 aaKnown RBP11.3□□□□□ -0.6
NEK9-205ENST00000555405 HSPA6P17066 643 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 ICAM3P32942 547 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 TMEM132AQ24JP5 1023 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 CCDC62Q6P9F0 684 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 KCNV1Q6PIU1 500 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 TLK2Q86UE8 772 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 FAM178BQ8IXR5 827 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 SYCP3Q8IZU3 236 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 C7orf25Q9BPX7 421 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 SAMSN1Q9NSI8 373 aaKnown RBP11.3□□□□□ -0.6
NEK9-205ENST00000555405 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 ATP1A3P13637 1013 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 TPM4P67936 248 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 TBC1D8BQ0IIM8 1120 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 LAMC2Q13753 1193 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 CNNM4Q6P4Q7 775 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 RBM43Q6ZSC3 357 aaKnown RBP11.3□□□□□ -0.6
NEK9-205ENST00000555405 UNC13DQ70J99 1090 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 RDH13Q8NBN7 331 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 DACH1Q9UI36 760 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 FAM184BQ9ULE4 1060 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 STK24Q9Y6E0 443 aa11.3□□□□□ -0.6
NEK9-205ENST00000555405 LRRIQ4A6NIV6 560 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 PSMA7O14818 248 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 CLIC2O15247 247 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 SLC16A4O15374 487 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 KLRC4O43908 158 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
NEK9-205ENST00000555405 GJB1P08034 283 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 ZNF658Q5TYW1 1059 aaPredicted RBP11.29□□□□□ -0.6
NEK9-205ENST00000555405 MLKLQ8NB16 471 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 DNAJC19Q96DA6 116 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 FAM49AQ9H0Q0 323 aaPredicted RBP11.29□□□□□ -0.6
NEK9-205ENST00000555405 MORC2Q9Y6X9 1032 aaPredicted RBP11.29□□□□□ -0.6
NEK9-205ENST00000555405 MYBP10242 640 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 ATP4AP20648 1035 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
NEK9-205ENST00000555405 SARSP49591 514 aaKnown RBP11.29□□□□□ -0.6
NEK9-205ENST00000555405 KCNA1Q09470 495 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 TMEM62Q0P6H9 643 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 XKR3Q5GH77 459 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 SLC7A3Q8WY07 619 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 PCYT2Q99447 389 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
NEK9-205ENST00000555405 K7ENM7 598 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 DKC1O60832 514 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEK9-205ENST00000555405 OATP04181 439 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 HARSP12081 509 aaKnown RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 MATR3P43243 847 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEK9-205ENST00000555405 CASP5P51878 434 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 ARHGAP1Q07960 439 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 PAK1Q13153 545 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 DUSP28Q4G0W2 176 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 IQSEC1Q6DN90 963 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 B3GNT9Q6UX72 402 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 C4orf19Q8IY42 314 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 NEK9Q8TD19 979 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 PARVGQ9HBI0 331 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 CYP26B1Q9NR63 512 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 SRRDQ9UH36 339 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 NFASCO94856 1347 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 LOC285556D6RIA3 1793 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 DOCK5Q9H7D0 1870 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 H3BRB1 525 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 CLSTN1O94985 981 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 LGALS2P05162 132 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 MYL5Q02045 173 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 CACNB2Q08289 660 aaPredicted RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 TUT1Q9H6E5 874 aaKnown RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 MAGEF1Q9HAY2 307 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 KIAA1217Q5T5P2 1943 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 PARP14Q460N5 1801 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 SMTNL1A8MU46 457 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 CLCN3P51790 818 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 PMS1P54277 932 aaKnown RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 BRDTQ58F21 947 aaPredicted RBP11.28□□□□□ -0.6
NEK9-205ENST00000555405 HYIQ5T013 277 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 CXCL17Q6UXB2 119 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 C1orf186Q6ZWK4 172 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 KIAA0895Q8NCT3 520 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 BICD1Q96G01 975 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 NLRP4Q96MN2 994 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 SMARCAD1Q9H4L7 1026 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 MMRN2Q9H8L6 949 aa11.28□□□□□ -0.6
NEK9-205ENST00000555405 SPC25Q9HBM1 224 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms