RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 ZNF302Q9NR11 478 aa17.62■□□□□ 0.41
NEDD1-207ENST00000555114 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
NEDD1-207ENST00000555114 IGKV6D-21A0A0A0MT36 114 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 DDX39AO00148 427 aaKnown RBP17.61■□□□□ 0.41
NEDD1-207ENST00000555114 SRGAP2BP0DMP2 458 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 DNAJB1P25685 340 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 MCTP2Q6DN12 878 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 PDE12Q6L8Q7 609 aaKnown RBP17.61■□□□□ 0.41
NEDD1-207ENST00000555114 PDXDC2PQ6P474 469 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 SLC24A5Q71RS6 500 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 CKAP2LQ8IYA6 745 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 SMRP1Q8NCR6 262 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 CDCA3Q99618 268 aaPredicted RBP17.61■□□□□ 0.41
NEDD1-207ENST00000555114 TMX1Q9H3N1 280 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 TLE6Q9H808 572 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 ERVK-5Q9HDB9 667 aa17.61■□□□□ 0.41
NEDD1-207ENST00000555114 V9GY48 417 aaPredicted RBP17.61■□□□□ 0.41
NEDD1-207ENST00000555114 GOLGA8AA7E2F4 631 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 TBKBP1A7MCY6 615 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 GOLGA8BA8MQT2 603 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 PPFIA3O75145 1194 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 PKN1Q16512 942 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 TYW1BQ6NUM6 668 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 ABHD15Q6UXT9 468 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 HFE2Q6ZVN8 426 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 DHX32Q7L7V1 743 aaKnown RBP17.6■□□□□ 0.41
NEDD1-207ENST00000555114 ADGRD2Q7Z7M1 963 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 RBM23Q86U06 439 aaKnown RBP17.6■□□□□ 0.41
NEDD1-207ENST00000555114 PLA2G4DQ86XP0 818 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 EDAQ92838 391 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 FBXL18Q96ME1 805 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 ADAM2Q99965 735 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 TLR9Q9NR96 1032 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 RGS18Q9NS28 235 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 CEP131Q9UPN4 1083 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 ATG2AQ2TAZ0 1938 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 PIEZO1Q92508 2521 aa17.6■□□□□ 0.41
NEDD1-207ENST00000555114 CCNE2O96020 404 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 GATMP50440 423 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 RCAN1P53805 252 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 SETQ01105 290 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 NHLH1Q02575 133 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 COL9A3Q14050 684 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 KRT32Q14532 448 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 CCDC60Q8IWA6 550 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 THNSL1Q8IYQ7 743 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 KIAA0319LQ8IZA0 1049 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 CCDC12Q8WUD4 166 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 BBXQ8WY36 941 aaPredicted RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 ATP6V0A4Q9HBG4 840 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 TBC1D22BQ9NU19 505 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 CLEC1BQ9P126 229 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 ST3GAL5Q9UNP4 418 aa17.59■□□□□ 0.41
NEDD1-207ENST00000555114 NOC2LQ9Y3T9 749 aaKnown RBP17.59■□□□□ 0.41
NEDD1-207ENST00000555114 CCDC196A0A1B0GTZ2 297 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 HOXA2O43364 376 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 LAG3P18627 525 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 CLK2P49760 499 aaKnown RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 MRE11P49959 708 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 IRX6P78412 446 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 FGD1P98174 961 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 SWSAP1Q6NVH7 229 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 ZNF710Q8N1W2 664 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 ZNF577Q9BSK1 485 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 TMEM161AQ9NX61 479 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 TMEM260Q9NX78 707 aa17.58■□□□□ 0.4
NEDD1-207ENST00000555114 PUF60Q9UHX1 559 aaKnown RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 NAP1L2Q9ULW6 460 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 BARX2Q9UMQ3 279 aaPredicted RBP17.58■□□□□ 0.4
NEDD1-207ENST00000555114 KLF18A0A0U1RQI7 1052 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 FGF18O76093 207 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 PSAPP07602 524 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 CYP3A4P08684 503 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
NEDD1-207ENST00000555114 FUT2Q10981 343 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 JAKMIP3Q5VZ66 844 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 ZNF746Q6NUN9 644 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-207ENST00000555114 METTL13Q8N6R0 699 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 OSMRQ99650 979 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 PRRX2Q99811 253 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 PHF7Q9BWX1 381 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-207ENST00000555114 ELAC1Q9H777 363 aaKnown RBP17.57■□□□□ 0.4
NEDD1-207ENST00000555114 C6orf50Q9HD87 102 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 BRPF3Q9ULD4 1205 aa17.57■□□□□ 0.4
NEDD1-207ENST00000555114 USP15Q9Y4E8 981 aaPredicted RBP17.57■□□□□ 0.4
NEDD1-207ENST00000555114 KIAA1671Q9BY89 1806 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 LOC730098B7Z3J9 87 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 C9IYK1 514 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 FAM86B1E9PN63 330 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 MAGEB2O15479 319 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 MGEA5O60502 916 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 GLP2RO95838 553 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 FAM86B2P0C5J1 330 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 ATF7P17544 494 aaPredicted RBP17.56■□□□□ 0.4
NEDD1-207ENST00000555114 TMOD1P28289 359 aa17.56■□□□□ 0.4
NEDD1-207ENST00000555114 EXOSC10Q01780 885 aaKnown RBP17.56■□□□□ 0.4
NEDD1-207ENST00000555114 PFKFB3Q16875 520 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms