RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 FILIP1LQ4L180 1135 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 DHX37Q8IY37 1157 aaKnown RBP19.29■□□□□ 0.68
SHOX-204ENST00000554971 AFG1LQ8WV93 481 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 BAG1Q99933 345 aaPredicted RBP19.29■□□□□ 0.68
SHOX-204ENST00000554971 TMEM106CQ9BVX2 250 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 NAA15Q9BXJ9 866 aaKnown RBP19.29■□□□□ 0.68
SHOX-204ENST00000554971 PSMD10O75832 226 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 CCNE2O96020 404 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 EN2P19622 333 aaPredicted RBP19.29■□□□□ 0.68
SHOX-204ENST00000554971 SPAG1Q07617 926 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 FSCN1Q16658 493 aaKnown RBP19.29■□□□□ 0.68
SHOX-204ENST00000554971 CDKAL1Q5VV42 579 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 GRAMD1CQ8IYS0 662 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 MTMR9Q96QG7 549 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 PANX2Q96RD6 677 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 NFASCO94856 1347 aa19.29■□□□□ 0.68
SHOX-204ENST00000554971 CST5P28325 142 aaPredicted RBP19.28■□□□□ 0.68
SHOX-204ENST00000554971 PRPHP41219 470 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 LAMC2Q13753 1193 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 B3GNT9Q6UX72 402 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 TMEM139Q8IV31 216 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 PPTC7Q8NI37 304 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 SPATA33Q96N06 139 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 MED15Q96RN5 788 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 GTPBP4Q9BZE4 634 aaKnown RBP19.28■□□□□ 0.68
SHOX-204ENST00000554971 MLXIPQ9HAP2 919 aa19.28■□□□□ 0.68
SHOX-204ENST00000554971 JPH1Q9HDC5 661 aaPredicted RBP19.28■□□□□ 0.68
SHOX-204ENST00000554971 LRRC10BA6NIK2 292 aa19.27■□□□□ 0.68
SHOX-204ENST00000554971 PPP1R3GB7ZBB8 358 aa19.27■□□□□ 0.68
SHOX-204ENST00000554971 DDX39AO00148 427 aaKnown RBP19.27■□□□□ 0.68
SHOX-204ENST00000554971 MMP3P08254 477 aa19.27■□□□□ 0.68
SHOX-204ENST00000554971 HOXD8P13378 290 aaPredicted RBP19.27■□□□□ 0.68
SHOX-204ENST00000554971 AFMP43652 599 aa19.27■□□□□ 0.68
SHOX-204ENST00000554971 SP4Q02446 784 aa19.27■□□□□ 0.68
SHOX-204ENST00000554971 PDXDC2PQ6P474 469 aa19.27■□□□□ 0.68
SHOX-204ENST00000554971 NAP1L4Q99733 375 aaKnown RBP19.27■□□□□ 0.68
SHOX-204ENST00000554971 TFRCP02786 760 aaKnown RBP19.27■□□□□ 0.67
SHOX-204ENST00000554971 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.67
SHOX-204ENST00000554971 ORC2Q13416 577 aaPredicted RBP19.27■□□□□ 0.67
SHOX-204ENST00000554971 GNASQ5JWF2 1037 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 TC2NQ8N9U0 490 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 GIMAP8Q8ND71 665 aaPredicted RBP19.27■□□□□ 0.67
SHOX-204ENST00000554971 DIS3LQ8TF46 1054 aaKnown RBP19.27■□□□□ 0.67
SHOX-204ENST00000554971 CCDC51Q96ER9 411 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 GPR20Q99678 358 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 AP5M1Q9H0R1 490 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 SAMSN1Q9NSI8 373 aaKnown RBP19.27■□□□□ 0.67
SHOX-204ENST00000554971 SLC9A2Q9UBY0 812 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 RWDD2AQ9UIY3 292 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 VAV3Q9UKW4 847 aa19.27■□□□□ 0.67
SHOX-204ENST00000554971 CCDC85CA6NKD9 419 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 TBX3O15119 743 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 SOX10P56693 466 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 SPIRE1Q08AE8 756 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 KCNA10Q16322 511 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 CALCRLQ16602 461 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 LRCH2Q5VUJ6 765 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 REXO1L1PQ8IX06 675 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 RIT2Q99578 217 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 MAGEF1Q9HAY2 307 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 TBC1D22BQ9NU19 505 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 ZNF215Q9UL58 517 aaPredicted RBP19.26■□□□□ 0.67
SHOX-204ENST00000554971 ITIH6Q6UXX5 1313 aa19.26■□□□□ 0.67
SHOX-204ENST00000554971 GSTTP1A0A1W2PQM5 241 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 TRIP12Q14669 1992 aaPredicted RBP19.25■□□□□ 0.67
SHOX-204ENST00000554971 ZNF658Q5TYW1 1059 aaPredicted RBP19.25■□□□□ 0.67
SHOX-204ENST00000554971 SYT10Q6XYQ8 523 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 APTXQ7Z2E3 356 aaKnown RBP19.25■□□□□ 0.67
SHOX-204ENST00000554971 RNF180Q86T96 592 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 ANKRD20A12PQ8NF67 263 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 FAM20AQ96MK3 541 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 CUEDC2Q9H467 287 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 AKR1B15C9JRZ8 316 aaPredicted RBP19.25■□□□□ 0.67
SHOX-204ENST00000554971 DNM1LO00429 736 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 GAS7O60861 476 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 ASGR1P07306 291 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 CPT1AP50416 773 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 DTHD1Q6ZMT9 781 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 UBE2Q1Q7Z7E8 422 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 ZNF397Q8NF99 534 aaPredicted RBP19.25■□□□□ 0.67
SHOX-204ENST00000554971 CCSER1Q9C0I3 900 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 UNC45AQ9H3U1 944 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 SPC25Q9HBM1 224 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 PPP2R2CQ9Y2T4 447 aa19.25■□□□□ 0.67
SHOX-204ENST00000554971 LAMA3Q16787 3333 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 ALPK3Q96L96 1907 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 PBX1P40424 430 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 ACTR2P61160 394 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 PURAQ00577 322 aaKnown RBP19.24■□□□□ 0.67
SHOX-204ENST00000554971 TRIM65Q6PJ69 517 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 PPFIBP1Q86W92 1011 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 ARRDC4Q8NCT1 418 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 AK8Q96MA6 479 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 LIMA1Q9UHB6 759 aaKnown RBP19.24■□□□□ 0.67
SHOX-204ENST00000554971 PDE4DIPQ5VU43 2346 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 KAT6AQ92794 2004 aa19.24■□□□□ 0.67
SHOX-204ENST00000554971 ATG7O95352 703 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 ZNF286BP0CG31 522 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 KCNB1Q14721 858 aa19.23■□□□□ 0.67
SHOX-204ENST00000554971 IL17AQ16552 155 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms