RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 CABS1Q96KC9 395 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 TSKSQ9UJT2 592 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 UTP11Q9Y3A2 253 aaKnown RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
XRCC3-208ENST00000554811 CCDC121Q6ZUS5 278 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 FAM84AQ96KN4 292 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 ACP6Q9NPH0 428 aa12.92□□□□□ -0.34
XRCC3-208ENST00000554811 CASZ1Q86V15 1759 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 ZNF233A6NK53 670 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 TISP43B9A030 160 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 SPOPO43791 374 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 CRKP46108 304 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 MAGOHP61326 146 aaKnown RBP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 ERVK-9P63128 1117 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 MAGOHBQ96A72 148 aaKnown RBP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 LRRC4BQ9NT99 713 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 DNAJC12Q9UKB3 198 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 GNA14O95837 355 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 VIMP08670 466 aaKnown RBP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 LSP1P33241 339 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 SHMT1P34896 483 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 GALCP54803 685 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 CORO7P57737 925 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 TRIM59Q8IWR1 403 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 PPM1KQ8N3J5 372 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 PAIP2Q9BPZ3 127 aaKnown RBP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 NUCKS1Q9H1E3 243 aaKnown RBP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 NAGPAQ9UK23 515 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 CCDC169A6NNP5 214 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 FAM86B1E9PN63 330 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 K7ENM7 598 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 FAM86B2P0C5J1 330 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 FLT3P36888 993 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 GCLMP48507 274 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 AARSP49588 968 aaKnown RBP eCLIP12.91□□□□□ -0.34
XRCC3-208ENST00000554811 CAPN12Q6ZSI9 719 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 PROM2Q8N271 834 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
XRCC3-208ENST00000554811 CNTNAP4Q9C0A0 1308 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 SSU72P8A0A1W2PR75 194 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 EVI5O60447 810 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 PON1P27169 355 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 FIGNQ5HY92 759 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 CCDC26Q8TAB7 109 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 EIF2AK1Q9BQI3 630 aaKnown RBP12.9□□□□□ -0.34
XRCC3-208ENST00000554811 UBE2TQ9NPD8 197 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-208ENST00000554811 AJAP1Q9UKB5 411 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-208ENST00000554811 CD2APQ9Y5K6 639 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 GOLGA6L10A0A0M3HER8 536 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-208ENST00000554811 ECE1P42892 770 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 C2CD6Q53TS8 623 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 ALS2CLQ60I27 953 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 TAB3Q8N5C8 712 aaPredicted RBP12.9□□□□□ -0.34
XRCC3-208ENST00000554811 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 CACNA1SQ13698 1873 aa12.9□□□□□ -0.34
XRCC3-208ENST00000554811 A0A087WUV0 522 aaPredicted RBP12.9□□□□□ -0.35
XRCC3-208ENST00000554811 TMEM150BA6NC51 233 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 PHF20L1A8MW92 1017 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 EML1O00423 815 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 NDUFB10O96000 172 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 ARSHQ5FYA8 562 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 CCDC105Q8IYK2 499 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 SLFN12Q8IYM2 578 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.35
XRCC3-208ENST00000554811 BTBD6Q96KE9 485 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.35
XRCC3-208ENST00000554811 TAF1DQ9H5J8 278 aaPredicted RBP12.9□□□□□ -0.35
XRCC3-208ENST00000554811 BBOX1O75936 387 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 CALCAP01258 141 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 KRT5P13647 590 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 HSD17B3P37058 310 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 ACTN3Q08043 901 aaPredicted RBP12.89□□□□□ -0.35
XRCC3-208ENST00000554811 GIT2Q14161 759 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 E2F5Q15329 346 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 ANKRD42Q8N9B4 389 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 LMBR1Q8WVP7 490 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 GSTTP1A0A1W2PQM5 241 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 HARSP12081 509 aaKnown RBP12.89□□□□□ -0.35
XRCC3-208ENST00000554811 GYS1P13807 737 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 GCFC2P16383 781 aaKnown RBP12.89□□□□□ -0.35
XRCC3-208ENST00000554811 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
XRCC3-208ENST00000554811 TMEM119Q4V9L6 283 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 LRRC45Q96CN5 670 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 THOC1Q96FV9 657 aaKnown RBP12.89□□□□□ -0.35
XRCC3-208ENST00000554811 CEP63Q96MT8 703 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 KCNK9Q9NPC2 374 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 DOT1LQ8TEK3 1739 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 SNED1Q8TER0 1413 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 BMP3P12645 472 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 KCNJ1P48048 391 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 MICALCLQ6ZW33 695 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 B4GALNT4Q76KP1 1039 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 ATP6V1G3Q96LB4 118 aa12.89□□□□□ -0.35
XRCC3-208ENST00000554811 CCT8L2Q96SF2 557 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms