RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 PODXL2Q9NZ53 605 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 KIAA1522Q9P206 1035 aaPredicted RBP3.94□□□□□ -1.78
SRP54-204ENST00000553923 Q9UFV3 132 aa3.94□□□□□ -1.78
SRP54-204ENST00000553923 CAPN14A8MX76 684 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 YOD1Q5VVQ6 348 aaPredicted RBP3.93□□□□□ -1.78
SRP54-204ENST00000553923 LRSAM1Q6UWE0 723 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 NSMFQ6X4W1 530 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 BCL6BQ8N143 479 aaPredicted RBP3.93□□□□□ -1.78
SRP54-204ENST00000553923 SHCBP1Q8NEM2 672 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 MPHOSPH9Q99550 1183 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 ZNF408Q9H9D4 720 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 REXO2Q9Y3B8 237 aaKnown RBP3.93□□□□□ -1.78
SRP54-204ENST00000553923 SH3BP1Q9Y3L3 701 aa3.93□□□□□ -1.78
SRP54-204ENST00000553923 ECE1P42892 770 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 SCNN1GP51170 649 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 HERVK_113P62684 666 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 HHEXQ03014 270 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 MOGSQ13724 837 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 SAFB2Q14151 953 aaKnown RBP eCLIP3.92□□□□□ -1.78
SRP54-204ENST00000553923 SEC23AQ15436 765 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 FIGNQ5HY92 759 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 TMCO4Q5TGY1 634 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 LAIR1Q6GTX8 287 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 Q6ZRM9 215 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 MRGPREQ86SM8 312 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 OSTM1Q86WC4 334 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 PTRH1Q86Y79 214 aaKnown RBP3.92□□□□□ -1.78
SRP54-204ENST00000553923 GPR150Q8NGU9 434 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 OR14K1Q8NGZ2 314 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 NTN5Q8WTR8 489 aaPredicted RBP3.92□□□□□ -1.78
SRP54-204ENST00000553923 MRRFQ96E11 262 aaKnown RBP3.92□□□□□ -1.78
SRP54-204ENST00000553923 TMEM176AQ96HP8 235 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 CCSER2Q9H7U1 834 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 CBLCQ9ULV8 474 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 TRAF6Q9Y4K3 522 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 ATP23Q9Y6H3 246 aa3.92□□□□□ -1.78
SRP54-204ENST00000553923 TMEM191CA6NGB0 347 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 ZNF561-AS1K7EIQ3 104 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 CYP27B1O15528 508 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 CLASP2O75122 1294 aaKnown RBP3.91□□□□□ -1.78
SRP54-204ENST00000553923 FGRP09769 529 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 BMP5P22003 454 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 MEOX1P50221 254 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 JAM2P57087 298 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 RIN1Q13671 783 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 TOB2Q14106 344 aaPredicted RBP3.91□□□□□ -1.78
SRP54-204ENST00000553923 CCDC142Q17RM4 750 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 RHOUQ7L0Q8 258 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 OTOP2Q7RTS6 562 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 PCDH19Q8TAB3 1148 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 RABGGTAQ92696 567 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 ALG1Q9BT22 464 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 OR10A5Q9H207 317 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 CAPN10Q9HC96 672 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 SMURF1Q9HCE7 757 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 ST7Q9NRC1 585 aa3.91□□□□□ -1.78
SRP54-204ENST00000553923 CTDP1Q9Y5B0 961 aaPredicted RBP3.91□□□□□ -1.78
SRP54-204ENST00000553923 MAFO75444 373 aaPredicted RBP3.9□□□□□ -1.79
SRP54-204ENST00000553923 PYGMP11217 842 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 STAT5BP51692 787 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 MFAP1P55081 439 aaKnown RBP3.9□□□□□ -1.79
SRP54-204ENST00000553923 ADAM8P78325 824 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 ST5P78524 1137 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 IFRD2Q12894 506 aaPredicted RBP3.9□□□□□ -1.79
SRP54-204ENST00000553923 PAK1Q13153 545 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 DDR2Q16832 855 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 C16orf59Q7L2K0 433 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 RTKN2Q8IZC4 609 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 HNRNPLLQ8WVV9 542 aaKnown RBP3.9□□□□□ -1.79
SRP54-204ENST00000553923 FBXW5Q969U6 566 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 UCKL1Q9NWZ5 548 aa3.9□□□□□ -1.79
SRP54-204ENST00000553923 TRAV20A0A0B4J274 112 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 ARVCFO00192 962 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 LMNAP02545 664 aaKnown RBP3.89□□□□□ -1.79
SRP54-204ENST00000553923 GCP02774 474 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 ADCY7P51828 1080 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 ZC3H6P61129 1189 aaKnown RBP3.89□□□□□ -1.79
SRP54-204ENST00000553923 LACTBP83111 547 aaPredicted RBP3.89□□□□□ -1.79
SRP54-204ENST00000553923 TM4SF20Q53R12 229 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 MBNL2Q5VZF2 373 aaKnown RBP3.89□□□□□ -1.79
SRP54-204ENST00000553923 GRAMD4Q6IC98 578 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 PRIMA1Q86XR5 153 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 VPS37DQ86XT2 251 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 ANKRD35Q8N283 1001 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 XDHP47989 1333 aa3.89□□□□□ -1.79
SRP54-204ENST00000553923 IQCA1LA6NCM1 817 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 PRAMEF25A6NGN4 478 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 UNCXA6NJT0 531 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 RASSF10A6NK89 507 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 TRAF5O00463 557 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 KLF4O43474 513 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 RPS6KA4O75676 772 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 MMEP08473 750 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 C6orf222P0C671 652 aaPredicted RBP3.88□□□□□ -1.79
SRP54-204ENST00000553923 LMO1P25800 156 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 STAT3P40763 770 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 FSTL1Q12841 308 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 CRHR2Q13324 411 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 ADAM15Q13444 863 aa3.88□□□□□ -1.79
SRP54-204ENST00000553923 ACAP1Q15027 740 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms