RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 ZNF205O95201 554 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 C8AP07357 584 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 CCL5P13501 91 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 ITGA4P13612 1032 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 KIR2DL1P43626 348 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-223ENST00000553686 KIR2DL2P43627 348 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-223ENST00000553686 SUPT20HL1Q3ZLR7 823 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 CEP128Q6ZU80 1094 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 APOBEC3FQ8IUX4 373 aaKnown RBP7.67□□□□□ -1.18
ATXN3-223ENST00000553686 FIBCD1Q8N539 461 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 FAM169BQ8N8A8 192 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 RAET1EQ8TD07 263 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 FAM84AQ96KN4 292 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 GMLQ99445 158 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 PTPN18Q99952 460 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 NSUN3Q9H649 340 aaKnown RBP7.67□□□□□ -1.18
ATXN3-223ENST00000553686 FHOD1Q9Y613 1164 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 UNC80Q8N2C7 3258 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 LAMA3Q16787 3333 aa7.67□□□□□ -1.18
ATXN3-223ENST00000553686 SGPL1O95470 568 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 TFRCP02786 760 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 NOP2P46087 812 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 CAP1Q01518 475 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 HEATR6Q6AI08 1181 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 ADAT2Q7Z6V5 191 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 SIRT2Q8IXJ6 389 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 TBC1D16Q8TBP0 767 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 U2AF1L4Q8WU68 220 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 RTF1Q92541 710 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 HAUS7Q99871 368 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 KCNK12Q9HB15 430 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 CWC22Q9HCG8 908 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 AP5S1Q9NUS5 200 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 TNFRSF10DQ9UBN6 386 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 RAPGEFL1Q9UHV5 662 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 DIS3Q9Y2L1 958 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 RRP7AQ9Y3A4 280 aaKnown RBP7.66□□□□□ -1.18
ATXN3-223ENST00000553686 MRVI1Q9Y6F6 885 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 IRS2Q9Y4H2 1338 aa7.66□□□□□ -1.18
ATXN3-223ENST00000553686 H0Y8X5 98 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 WNT10BO00744 389 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 CBFA2T2O43439 604 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 DIAPH1O60610 1272 aaKnown RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 SSBP05455 408 aaKnown RBP eCLIP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 GSTM1P09488 218 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 ENDOUP21128 410 aaKnown RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 GALK1P51570 392 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 RTP1P59025 263 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 GPSM2P81274 684 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 LACTBP83111 547 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 MAP3K12Q12852 859 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 TTLL7Q6ZT98 887 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 KRTAP19-1Q8IUB9 90 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 MAFAQ8NHW3 353 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 CEMIPQ8WUJ3 1361 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 CLMNQ96JQ2 1002 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 FCRL2Q96LA5 508 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 GUCD1Q96NT3 240 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 SLC38A3Q99624 504 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 SLC12A9Q9BXP2 914 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 NOL6Q9H6R4 1146 aaKnown RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 DCP1AQ9NPI6 582 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 YBX2Q9Y2T7 364 aaKnown RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 SF3B6Q9Y3B4 125 aaKnown RBP7.65□□□□□ -1.18
ATXN3-223ENST00000553686 RIPOR2Q9Y4F9 1068 aa7.65□□□□□ -1.18
ATXN3-223ENST00000553686 FADS2P1A8MWK0 482 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 NRDCO43847 1150 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 TLR2O60603 784 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 GTF2A2P52657 109 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 PPP2R5DQ14738 602 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 ZNF124Q15973 351 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 RTP2Q5QGT7 225 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 KIAA1211LQ6NV74 962 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 VHLLQ6RSH7 139 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 NECAB2Q7Z6G3 386 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 ANKRD13AQ8IZ07 590 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 KLHL6Q8WZ60 621 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 SNX27Q96L92 541 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 FGD4Q96M96 766 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 POLR3GLQ9BT43 218 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 DEFB129Q9H1M3 183 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 SLC6A17Q9H1V8 727 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 WHRNQ9P202 907 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 SRRDQ9UH36 339 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 TRMT112Q9UI30 125 aaKnown RBP7.64□□□□□ -1.19
ATXN3-223ENST00000553686 PPP2R3BQ9Y5P8 575 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 CENPFP49454 3210 aa7.64□□□□□ -1.19
ATXN3-223ENST00000553686 VCANP13611 3396 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 FAM205AQ6ZU69 1335 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 SH3TC1Q8TE82 1336 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 MYO3BQ8WXR4 1341 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 PPM1BO75688 479 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 EPHX1P07099 455 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 MYL6BP14649 208 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 MAGEA10P43363 369 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-223ENST00000553686 RPS8P62241 208 aaKnown RBP7.63□□□□□ -1.19
ATXN3-223ENST00000553686 PKN1Q16512 942 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 HSP90AB3PQ58FF7 597 aa7.63□□□□□ -1.19
ATXN3-223ENST00000553686 SYDE1Q6ZW31 735 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-223ENST00000553686 NLRX1Q86UT6 975 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms