RNA–Protein interactions for RNA: ENST00000552984.1

TUBA1B-208, Transcript of tubulin alpha 1b, humanhuman

TSL 4

Gene TUBA1B, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-208ENST00000552984 PTPROQ16827 1216 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 KIAA0319LQ8IZA0 1049 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 FBXL16Q8N461 479 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 CCDC12Q8WUD4 166 aaPredicted RBP13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 NSUN3Q9H649 340 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 HCSTQ9UBK5 93 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 GABBR1Q9UBS5 961 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 NOC2LQ9Y3T9 749 aaKnown RBP13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 KDM3AQ9Y4C1 1321 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 COL1A2P08123 1366 aa13.04□□□□□ -0.32
TUBA1B-208ENST00000552984 C5orf67F2Z3F1 127 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 CHMP2AO43633 222 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 VTNP04004 478 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 PSMA5P28066 241 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 GNA11P29992 359 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 CIITAP33076 1130 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 GTF2F1P35269 517 aaKnown RBP eCLIP13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 BMPR1AP36894 532 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 SLC26A2P50443 739 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 CLCN3P51790 818 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 EVCP57679 992 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 STK3Q13188 491 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 UGCGQ16739 394 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 KIZQ2M2Z5 673 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 LEXMQ3ZCV2 418 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 NPAS4Q8IUM7 802 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 CKAP2LQ8IYA6 745 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 CLP1Q92989 425 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 ZNF668Q96K58 619 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 OSMRQ99650 979 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 ZSWIM6Q9HCJ5 1215 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 ERVK-5Q9HDB9 667 aa13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 ALG13Q9NP73 1137 aaKnown RBP13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 MAFBQ9Y5Q3 323 aaPredicted RBP13.03□□□□□ -0.32
TUBA1B-208ENST00000552984 MSH4O15457 936 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 ZNF862O60290 1169 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 TDP2O95551 362 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 DNAJB1P25685 340 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 CAMK1Q14012 370 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 CLUL1Q15846 466 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 ZNF484Q5JVG2 852 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 PTCRAQ6ISU1 281 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 ZNF746Q6NUN9 644 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 LRRC71Q8N4P6 559 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 NEK9Q8TD19 979 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 TNPO1Q92973 898 aaKnown RBP13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 C11orf84Q9BUA3 381 aaPredicted RBP13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 FTHL17Q9BXU8 183 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 TBC1D22BQ9NU19 505 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 CLDND1Q9NY35 253 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 SAMM50Q9Y512 469 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 PCDHGC5Q9Y5F6 944 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 PCDHA10Q9Y5I2 948 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 SQORQ9Y6N5 450 aa13.02□□□□□ -0.33
TUBA1B-208ENST00000552984 TMEM150BA6NC51 233 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 FAM86C2PA6NEL3 165 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 LINC01565O15544 149 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 RPS6KA5O75582 802 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 RPLP2P05387 115 aaKnown RBP13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 PSAPP07602 524 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 LTBRP36941 435 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 NLRP5P59047 1200 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 PRKCEQ02156 737 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 DLX2Q07687 328 aaPredicted RBP13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 HYAL1Q12794 435 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 NPY5RQ15761 445 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 ADGRD2Q7Z7M1 963 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 FAM228AQ86W67 206 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 SMAP1Q8IYB5 467 aaPredicted RBP13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 NME8Q8N427 588 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 METTL13Q8N6R0 699 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 TBCKQ8TEA7 893 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 BBXQ8WY36 941 aaPredicted RBP13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 PABPC5Q96DU9 382 aaKnown RBP13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 ADAM2Q99965 735 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 UNC45AQ9H3U1 944 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 TCEAL9Q9UHQ7 104 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 ST3GAL5Q9UNP4 418 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 CYP46A1Q9Y6A2 500 aa13.01□□□□□ -0.33
TUBA1B-208ENST00000552984 GRXCR2A6NFK2 248 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 WDR64B1ANS9 1081 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 TBX10O75333 385 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 GPR32O75388 356 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 MMP1P03956 469 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 OATP04181 439 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 ITGB1P05556 798 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 RB1P06400 928 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 IRS1P35568 1242 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 SSRP1Q08945 709 aaKnown RBP13□□□□□ -0.33
TUBA1B-208ENST00000552984 COL19A1Q14993 1142 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 FAM102BQ5T8I3 360 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 FAM178BQ8IXR5 827 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 KLHL23Q8NBE8 558 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 BICD2Q8TD16 824 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 SLC5A5Q92911 643 aa13□□□□□ -0.33
TUBA1B-208ENST00000552984 SH2D3AQ9BRG2 576 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms