RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 NFXL1Q6ZNB6 911 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 CCDC129Q6ZRS4 1044 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 JMYQ8N9B5 988 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 GATAD2BQ8WXI9 593 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 WNK4Q96J92 1243 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 HHIPL1Q96JK4 782 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 MIPEPQ99797 713 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 ZNF341Q9BYN7 854 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 PRDM5Q9NQX1 630 aaPredicted RBP6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 VAV3Q9UKW4 847 aa6.67□□□□□ -1.34
SMARCC2-213ENST00000552627 COL2A1P02458 1487 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 MYH8P13535 1937 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 TMEM265A0A087WTH1 108 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 CST3P01034 146 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 HSPA1AP0DMV8 641 aaKnown RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 HSPA1BP0DMV9 641 aaKnown RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 ITIH2P19823 946 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 JAG1P78504 1218 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 PRKCQQ04759 706 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 FAM160A1Q05DH4 1040 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 UBE3CQ15386 1083 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 SNAP47Q5SQN1 464 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 DCAF15Q66K64 600 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 ANKRD13AQ8IZ07 590 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 ABI1Q8IZP0 508 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 AGBL5Q8NDL9 886 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 OSBP2Q969R2 916 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 RILPL2Q969X0 211 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 OPTNQ96CV9 577 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 CCDC136Q96JN2 1154 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 CRNKL1Q9BZJ0 848 aaKnown RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 DNAJC18Q9H819 358 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 PAK6Q9NQU5 681 aaPredicted RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 KBTBD4Q9NVX7 518 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 TJP2Q9UDY2 1190 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 TPX2Q9ULW0 747 aaKnown RBP6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 PLAGL2Q9UPG8 496 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 PCNTO95613 3336 aa6.66□□□□□ -1.34
SMARCC2-213ENST00000552627 A0A0D9SFI3 127 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 FOXN1O15353 648 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 GPAA1O43292 621 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 GSPT1P15170 499 aaKnown RBP6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 PLCD1P51178 756 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 BNIP3Q12983 259 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 NOGQ13253 232 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 SLC6A19Q695T7 634 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 ZSCAN25Q6NSZ9 544 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 LETMD1Q6P1Q0 360 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 SPRED2Q7Z698 418 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 MCATQ8IVS2 390 aaKnown RBP6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 MRPL41Q8IXM3 137 aaKnown RBP6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 CRACR2BQ8N4Y2 399 aaPredicted RBP6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 SLC44A5Q8NCS7 719 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 APPBP2Q92624 585 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 HOOK2Q96ED9 719 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 TMEM87BQ96K49 555 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 HRASLS5Q96KN8 279 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 FAM227BQ96M60 508 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 DCP1AQ9NPI6 582 aaPredicted RBP6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 MCM9Q9NXL9 1143 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 GGT7Q9UJ14 662 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 ZNF112Q9UJU3 913 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 ADAM30Q9UKF2 790 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 MAPK8IP1Q9UQF2 711 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 SNX11Q9Y5W9 270 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 SLC4A4Q9Y6R1 1079 aa6.65□□□□□ -1.34
SMARCC2-213ENST00000552627 PTPRFP10586 1907 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 EIF5BO60841 1220 aaKnown RBP6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 IGSF3O75054 1194 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 MAP2K2P36507 400 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 NMIQ13287 307 aaPredicted RBP6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 TTC22Q5TAA0 569 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 VPS53Q5VIR6 699 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 CENPQQ7L2Z9 268 aaPredicted RBP6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 HS2ST1Q7LGA3 356 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 RIN3Q8TB24 985 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 EVI5LQ96CN4 794 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 DYNLL2Q96FJ2 89 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 STRBPQ96SI9 672 aaKnown RBP6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 TNKS2Q9H2K2 1166 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 EPB41L4AQ9HCS5 686 aaPredicted RBP6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 PI4KBQ9UBF8 816 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 ADGRE2Q9UHX3 823 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
SMARCC2-213ENST00000552627 GSG1L2A8MUP6 293 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 LOC285556D6RIA3 1793 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 FOXP2O15409 715 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 APPP05067 770 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 ZFYP08048 801 aaPredicted RBP6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 ZBTB48P10074 688 aaPredicted RBP6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 PLCG1P19174 1290 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 SDSP20132 328 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 SHMT1P34896 483 aa6.63□□□□□ -1.35
SMARCC2-213ENST00000552627 EIF4A3P38919 411 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms