RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 FOSP01100 380 aaPredicted RBP16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 SIGLEC14Q08ET2 396 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 SLC24A5Q71RS6 500 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 THNSL1Q8IYQ7 743 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 FANCBQ8NB91 859 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 ERVK-5Q9HDB9 667 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 RGS18Q9NS28 235 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 PCDHGC5Q9Y5F6 944 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 KMT2EQ8IZD2 1858 aa16.18■□□□□ 0.18
CHMP1A-210ENST00000551981 COL1A2P08123 1366 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 BACH1O14867 736 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 PER2O15055 1255 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 GPR182O15218 404 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 HBP1O60381 514 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 FGF18O76093 207 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 ARP10275 920 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 KLRC1P26715 233 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 NAPAP54920 295 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 ITGB3BPQ13352 177 aaPredicted RBP16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 DUSP6Q16828 381 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 IER5LQ5T953 404 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 PPP1R18Q6NYC8 613 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 SYNE3Q6ZMZ3 975 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 CYP2W1Q8TAV3 490 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 ATP8B4Q8TF62 1192 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 ADAM2Q99965 735 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 AGO4Q9HCK5 861 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 RIC8AQ9NPQ8 531 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 TMEM260Q9NX78 707 aa16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 NOC2LQ9Y3T9 749 aaKnown RBP16.17■□□□□ 0.18
CHMP1A-210ENST00000551981 EVPLQ92817 2033 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 ATG7O95352 703 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 LAG3P18627 525 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 ZNF76P36508 570 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 ADCY7P51828 1080 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 ZNF484Q5JVG2 852 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 MICU3Q86XE3 530 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 RAB11FIP4Q86YS3 637 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 COLGALT1Q8NBJ5 622 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 SUSD6Q92537 303 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 PHOX2BQ99453 314 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 IRF2BPLQ9H1B7 796 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 ATP6V0A4Q9HBG4 840 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 PUF60Q9UHX1 559 aaKnown RBP16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 ST3GAL5Q9UNP4 418 aa16.16■□□□□ 0.18
CHMP1A-210ENST00000551981 IGKV6D-21A0A0A0MT36 114 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 C9IYK1 514 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 MEIS1O00470 390 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 ST18O60284 1047 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 MGEA5O60502 916 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 ERVFC1P60507 584 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 FAM102BQ5T8I3 360 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 ABHD15Q6UXT9 468 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 VN1R2Q8NFZ6 395 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 ANO3Q9BYT9 981 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 GLT8D2Q9H1C3 349 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 ZNF302Q9NR11 478 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 TYW1Q9NV66 732 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 TMEM161AQ9NX61 479 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 LZTS1Q9Y250 596 aa16.15■□□□□ 0.18
CHMP1A-210ENST00000551981 hCG_1984214I3L0E3 225 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 DDX39AO00148 427 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 FSCN2O14926 492 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 HOXA2O43364 376 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 CRYBB1P53674 252 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 RBM10P98175 930 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 TCF15Q12870 199 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 AP3B2Q13367 1082 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 PTPN21Q16825 1174 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 PLPP4Q5VZY2 271 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 MIS18BP1Q6P0N0 1132 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 PDXDC2PQ6P474 469 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 TMEM184AQ6ZMB5 413 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 NIPA1Q7RTP0 329 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 ZBTB33Q86T24 672 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 SGMS1Q86VZ5 419 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 ZNF713Q8N859 430 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 TMEM40Q8WWA1 233 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 PGBD1Q96JS3 809 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 ELAC1Q9H777 363 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 CDHR5Q9HBB8 845 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 ENTPD7Q9NQZ7 604 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 MYH9P35579 1960 aaKnown RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 CACNA1HO95180 2353 aa16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 ZFHX2Q9C0A1 2572 aaPredicted RBP16.14■□□□□ 0.17
CHMP1A-210ENST00000551981 SLC27A2O14975 620 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 CCNE2O96020 404 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 PPM1AP35813 382 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 SREBF1P36956 1147 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 TECP42680 631 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 PLCB3Q01970 1234 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 KIZQ2M2Z5 673 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 ANKRD54Q6NXT1 300 aa16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 CCDC60Q8IWA6 550 aaPredicted RBP16.13■□□□□ 0.17
CHMP1A-210ENST00000551981 CKAP2LQ8IYA6 745 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms