RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 FAM170AA1A519 330 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 CHMP2AO43633 222 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 CEP104O60308 925 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 FOSP01100 380 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-219ENST00000551544 RPL13P26373 211 aaKnown RBP14.25□□□□□ -0.13
CACNB3-219ENST00000551544 ALDH1B1P30837 517 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 EPHA7Q15375 998 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 KCTD19Q17RG1 926 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-219ENST00000551544 GBP6Q6ZN66 633 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 BZW2Q9Y6E2 419 aaKnown RBP14.25□□□□□ -0.13
CACNB3-219ENST00000551544 KIF4AO95239 1232 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 GH2P01242 217 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 POLD1P28340 1107 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 TNNC1P63316 161 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 JAG1P78504 1218 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-219ENST00000551544 VAV3Q9UKW4 847 aa14.25□□□□□ -0.13
CACNB3-219ENST00000551544 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
CACNB3-219ENST00000551544 AFF2P51816 1311 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 TMCO5BA8MYB1 307 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 BMP3P12645 472 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 CCT5P48643 541 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 NNTQ13423 1086 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 C10orf76Q5T2E6 689 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 TATDN1Q6P1N9 297 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 PODNQ7Z5L7 613 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 TPH2Q8IWU9 490 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 FAM107BQ9H098 131 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 OPLAHO14841 1288 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 ZBTB39O15060 712 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 FLOT1O75955 427 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 NMT1P30419 496 aaKnown RBP14.24□□□□□ -0.13
CACNB3-219ENST00000551544 ATP1A2P50993 1020 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 HLTFQ14527 1009 aaKnown RBP eCLIP14.24□□□□□ -0.13
CACNB3-219ENST00000551544 KSR1Q8IVT5 923 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 MYCT1Q8N699 235 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 AP1M1Q9BXS5 423 aa14.24□□□□□ -0.13
CACNB3-219ENST00000551544 METTL14Q9HCE5 456 aaKnown RBP14.24□□□□□ -0.13
CACNB3-219ENST00000551544 GFPT2O94808 682 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 FAM13AO94988 1023 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 EYA4O95677 639 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 ZC2HC1CQ53FD0 456 aaPredicted RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 MCTP2Q6DN12 878 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 RINT1Q6NUQ1 792 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 BCAS4Q8TDM0 211 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 U2AF1L4Q8WU68 220 aaKnown RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 IDI2Q9BXS1 227 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 SIX2Q9NPC8 291 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 QSER1Q2KHR3 1735 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 ZNF233A6NK53 670 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 GTF2A1P52655 376 aaPredicted RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 UBXN2AP68543 259 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 IFI16Q16666 785 aaKnown RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 VPS36Q86VN1 386 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 IQCKQ8N0W5 287 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 GMCL1P1Q8NEA9 526 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 GMCL1Q96IK5 515 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 TDRD3Q9H7E2 651 aaKnown RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 BTNL10A8MVZ5 291 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 EIF3HO15372 352 aaKnown RBP eCLIP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 TGFB1I1O43294 461 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 CFBP00751 764 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 CIITAP33076 1130 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 PDCLQ13371 301 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 LRRC57Q8N9N7 239 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 TPCN2Q8NHX9 752 aa14.23□□□□□ -0.13
CACNB3-219ENST00000551544 POLR3CQ9BUI4 534 aaPredicted RBP14.23□□□□□ -0.13
CACNB3-219ENST00000551544 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 A0A1W2PRG0 241 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 SLC16A3O15427 465 aaKnown RBP14.22□□□□□ -0.13
CACNB3-219ENST00000551544 H2AFZP0C0S5 128 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
CACNB3-219ENST00000551544 BMT2Q1RMZ1 405 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 RBM26Q5T8P6 1007 aaKnown RBP14.22□□□□□ -0.13
CACNB3-219ENST00000551544 H2AFVQ71UI9 128 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 PEX26Q7Z412 305 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 FAM186BQ8IYM0 893 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 DYDC2Q96IM9 177 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 PBKQ96KB5 322 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 PRR12Q9ULL5 1215 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 STK24Q9Y6E0 443 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 GRIN2DO15399 1336 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 A0A087WUV0 522 aaPredicted RBP14.22□□□□□ -0.13
CACNB3-219ENST00000551544 DDX3XO00571 662 aaKnown RBP eCLIP14.22□□□□□ -0.13
CACNB3-219ENST00000551544 ONECUT3O60422 494 aaPredicted RBP14.22□□□□□ -0.13
CACNB3-219ENST00000551544 PDE6BP35913 854 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 PRKCIP41743 596 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 COG2Q14746 738 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 DACT2Q5SW24 774 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 METTL13Q8N6R0 699 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 PIK3R5Q8WYR1 880 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 MASTLQ96GX5 879 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 TMEM59LQ9UK28 342 aa14.22□□□□□ -0.13
CACNB3-219ENST00000551544 ECE2O60344 883 aa14.21□□□□□ -0.13
CACNB3-219ENST00000551544 MMP14P50281 582 aa14.21□□□□□ -0.13
CACNB3-219ENST00000551544 JAM2P57087 298 aa14.21□□□□□ -0.13
CACNB3-219ENST00000551544 ERVK-9P63128 1117 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms