RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 NDUFV1P49821 464 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 SETQ01105 290 aaPredicted RBP26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 AKAP17AQ02040 695 aaKnown RBP26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 FUT2Q10981 343 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 PFKFB3Q16875 520 aaPredicted RBP26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 JAKMIP3Q5VZ66 844 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 SWSAP1Q6NVH7 229 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 ZNF577Q9BSK1 485 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 CD207Q9UJ71 328 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 LOXHD1Q8IVV2 1947 aa26.21■■□□□ 1.79
SMARCD1-209ENST00000550477 CYP3A4P08684 503 aa26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 IBSPP21815 317 aaPredicted RBP26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 SMAD4Q13485 552 aaKnown RBP26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 CENPQQ7L2Z9 268 aaPredicted RBP26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 CRIPAKQ8N1N5 446 aa26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 KLHL23Q8NBE8 558 aa26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 SPPL3Q8TCT6 385 aa26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 BBXQ8WY36 941 aaPredicted RBP26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 CEP131Q9UPN4 1083 aa26.2■■□□□ 1.78
SMARCD1-209ENST00000550477 C19orf67A6NJJ6 358 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 MBTPS2O43462 519 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 CDC45O75419 566 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 ITGB1P05556 798 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 ADAM15Q13444 863 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 CLUL1Q15846 466 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 ZNF746Q6NUN9 644 aaPredicted RBP26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 SMAP1Q8IYB5 467 aaPredicted RBP26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 POF1BQ8WVV4 589 aa26.19■■□□□ 1.78
SMARCD1-209ENST00000550477 ESYT2A0FGR8 921 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 FSD2A1L4K1 749 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 CCNE2O96020 404 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 CDC27P30260 824 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 TMEM266Q2M3C6 531 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 ADCK5Q3MIX3 580 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 SLC24A5Q71RS6 500 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 CCDC60Q8IWA6 550 aaPredicted RBP26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 KIAA0319LQ8IZA0 1049 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 REXO1Q8N1G1 1221 aaKnown RBP26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 BICD2Q8TD16 824 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 MICAL1Q8TDZ2 1067 aa26.18■■□□□ 1.78
SMARCD1-209ENST00000550477 MYH9P35579 1960 aaKnown RBP26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 FAM86B1E9PN63 330 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 PSAPP07602 524 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 FAM86B2P0C5J1 330 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 UBE3AQ05086 875 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 RASEFQ8IZ41 740 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 ZNF710Q8N1W2 664 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 ADAM2Q99965 735 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 ZMYND12Q9H0C1 365 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 ERVK-5Q9HDB9 667 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 RGS18Q9NS28 235 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 FAM217BQ9NTX9 383 aaPredicted RBP26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 ST3GAL5Q9UNP4 418 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 NOC2LQ9Y3T9 749 aaKnown RBP26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 PCDHA10Q9Y5I2 948 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 EVPLQ92817 2033 aa26.17■■□□□ 1.78
SMARCD1-209ENST00000550477 MAGEB2O15479 319 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 TMOD1P28289 359 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 HOXD11P31277 338 aaPredicted RBP26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 ADD1P35611 737 aaKnown RBP26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 CRYBB1P53674 252 aaPredicted RBP26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 DLX2Q07687 328 aaPredicted RBP26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 METTL13Q8N6R0 699 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 EFHBQ8N7U6 833 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 FAM167AQ96KS9 214 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 TMX1Q9H3N1 280 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 SAMM50Q9Y512 469 aa26.16■■□□□ 1.78
SMARCD1-209ENST00000550477 TBKBP1A7MCY6 615 aa26.15■■□□□ 1.78
SMARCD1-209ENST00000550477 DHX15O43143 795 aaKnown RBP26.15■■□□□ 1.78
SMARCD1-209ENST00000550477 PPFIA3O75145 1194 aa26.15■■□□□ 1.78
SMARCD1-209ENST00000550477 CAMK1Q14012 370 aa26.15■■□□□ 1.78
SMARCD1-209ENST00000550477 ATP6V0A4Q9HBG4 840 aa26.15■■□□□ 1.78
SMARCD1-209ENST00000550477 MAFBQ9Y5Q3 323 aaPredicted RBP26.15■■□□□ 1.78
SMARCD1-209ENST00000550477 IGLV3-22A0A075B6J6 115 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 PRPF3O43395 683 aaKnown RBP26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 TBX10O75333 385 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 GTF2F1P35269 517 aaKnown RBP eCLIP26.14■■□□□ 1.786e-17■■■■■ 36.5
SMARCD1-209ENST00000550477 IRS1P35568 1242 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 NRIP1P48552 1158 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 PDE12Q6L8Q7 609 aaKnown RBP26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 BLOC1S2Q6QNY1 142 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 Q6ZUG5 572 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 CCDC148Q8NFR7 591 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 MAP7D2Q96T17 732 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 TLE6Q9H808 572 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 NRBP2Q9NSY0 501 aa26.14■■□□□ 1.78
SMARCD1-209ENST00000550477 HOXA2O43364 376 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 SRGAP2BP0DMP2 458 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 ZSCAN20P17040 1043 aaPredicted RBP26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 APOBRQ0VD83 1088 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 KIZQ2M2Z5 673 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 PRR16Q569H4 304 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 TRMT1LQ7Z2T5 733 aaKnown RBP26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 THNSL1Q8IYQ7 743 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 BRF1Q92994 677 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 OSMRQ99650 979 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 KCNH6Q9H252 994 aa26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 ELAC1Q9H777 363 aaKnown RBP26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 PUF60Q9UHX1 559 aaKnown RBP26.13■■□□□ 1.77
SMARCD1-209ENST00000550477 LINC01565O15544 149 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms