RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 HOOK2Q96ED9 719 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 SEC16BQ96JE7 1060 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 SLITRK6Q9H5Y7 841 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 ANAPC5Q9UJX4 755 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 CIB2O75838 187 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 TAF11Q15544 211 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 WDR78Q5VTH9 848 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 VCXQ9H320 206 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 SEMA6BQ9H3T3 888 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 BCS1LQ9Y276 419 aa11.05□□□□□ -0.64
SMARCC2-209ENST00000550164 TRIM49P0CI25 452 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 TRIM49CP0CI26 452 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 UCHL3P15374 230 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 HSD17B3P37058 310 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.644e-6■■■■■ 36.5
SMARCC2-209ENST00000550164 PTK2Q05397 1052 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 NAALADL2Q58DX5 795 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 ARHGEF18Q6ZSZ5 1173 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 CTAGE3PQ8IX95 158 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 MDM1Q8TC05 714 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 PACSIN1Q9BY11 444 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 NOP53Q9NZM5 478 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 JCADQ9P266 1359 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 RCCD1A6NED2 376 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 VEGFAP15692 232 aaPredicted RBP11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 SLC20A2Q08357 652 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 DNAAF5Q86Y56 855 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 TSEN2Q8NCE0 465 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 SPZ1Q9BXG8 430 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 SLC40A1Q9NP59 571 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 C1orf167Q5SNV9 1468 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 WNT7AO00755 349 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 GDF11O95390 407 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 FGFR2P21802 821 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 FGFR4P22455 802 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 GALCP54803 685 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 KDM7AQ6ZMT4 941 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 RHOT2Q8IXI1 618 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 SRRM1Q8IYB3 904 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 NEDD1Q8NHV4 660 aa11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 RIOK1Q9BRS2 568 aaKnown RBP11.04□□□□□ -0.64
SMARCC2-209ENST00000550164 TULP2O00295 520 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 PODXLO00592 558 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 TRIM37O94972 964 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FAM153BP0C7A2 387 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 POLR2MP0CAP2 368 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 HOXA7P31268 230 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 COPB2P35606 906 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 NSFP46459 744 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FAM153CQ494X1 144 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 CREG2Q8IUH2 290 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 CCDC89Q8N998 374 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 C1orf112Q9NSG2 853 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FAM153AQ9UHL3 310 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FAM196BA6NMK8 535 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 H0Y3Z8 333 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 ZBTB5O15062 677 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 CD19P15391 556 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 CHN1P15882 459 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 PRLRP16471 622 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 MXI1P50539 228 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 XKR9Q5GH70 373 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 CLEC4GQ6UXB4 293 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 PPP1R21Q6ZMI0 780 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 P3H4Q92791 437 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 MAK16Q9BXY0 300 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 TRIM6Q9C030 488 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 ISCUQ9H1K1 167 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 SYNGAP1Q96PV0 1343 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 WDR91A4D1P6 747 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 GOLGA8IPA6NC78 632 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 GOLGA8JA6NMD2 632 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 PDIA5Q14554 519 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FIGNQ5HY92 759 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 TTBK2Q6IQ55 1244 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 WDR59Q6PJI9 974 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 PALM2Q8IXS6 379 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 NT5C1BQ96P26 610 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 PITPNM3Q9BZ71 974 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 DHX36Q9H2U1 1008 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FTLP02792 175 aaPredicted RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 MFAP3P55082 362 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 SBK1Q52WX2 424 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 SCYL3Q8IZE3 742 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 AENQ8WTP8 325 aaKnown RBP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 RFFLQ8WZ73 363 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 CCDC17Q96LX7 622 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FAM167BQ9BTA0 163 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 TLR10Q9BXR5 811 aa11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMARCC2-209ENST00000550164 FOXP2O15409 715 aa11.02□□□□□ -0.64
SMARCC2-209ENST00000550164 ELF1P32519 619 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms