RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 RBM46Q8TBY0 533 aaKnown RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 ACTRT1Q8TDG2 376 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PBKQ96KB5 322 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 PAGR1Q9BTK6 254 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 SUDS3Q9H7L9 328 aaPredicted RBP11.24□□□□□ -0.61
ERBB3-214ENST00000550070 DONSONQ9NYP3 566 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 NAGPAQ9UK23 515 aa11.24□□□□□ -0.61
ERBB3-214ENST00000550070 FRMD3A2A2Y4 597 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L10C9JJH3 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 MYO1FO00160 1098 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 KIAA0754O94854 1291 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 UFL1O94874 794 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 IL1R1P14778 569 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 MRPL12P52815 198 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 SLC12A3P55017 1021 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 EDRF1Q3B7T1 1238 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 C10orf76Q5T2E6 689 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 MFSD4BQ5TF39 518 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 METTL13Q8N6R0 699 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 PRPF38AQ8NAV1 312 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 TMX4Q9H1E5 349 aaPredicted RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 CENPHQ9H3R5 247 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 PSTPIP2Q9H939 334 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 ATF5Q9Y2D1 282 aaPredicted RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 FOCADQ5VW36 1801 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L15C9J2P7 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L13C9JLJ4 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L11C9JVI0 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L18D6R9N7 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L22D6RA61 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L17D6RBQ6 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L19D6RCP7 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L20D6RJB6 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 SMAPO00193 183 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 SART1O43290 800 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 GCFC2P16383 781 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 PON1P27169 355 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 HOXD13P35453 343 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 FLT3P36888 993 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L24Q0WX57 530 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 MCTP2Q6DN12 878 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 ALKBH5Q6P6C2 394 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 USP17L6PQ6QN14 398 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 LRIG3Q6UXM1 1119 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 KCTD1Q719H9 257 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 SPATS2Q86XZ4 545 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 EIF1ADQ8N9N8 165 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 SPAG5Q96R06 1193 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 DDX47Q9H0S4 455 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 AJAP1Q9UKB5 411 aaPredicted RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 RTCBQ9Y3I0 505 aaKnown RBP11.23□□□□□ -0.61
ERBB3-214ENST00000550070 GAKO14976 1311 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
ERBB3-214ENST00000550070 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 KLHL33A6NCF5 533 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 E7EVH7 732 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 ZBTB5O15062 677 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 FSBPO95073 299 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 TTLL1O95922 423 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 KRT18P05783 430 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 PSMC6P62333 389 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 CUL1Q13616 776 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 POTEEQ6S8J3 1075 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 PPP4R3CPQ6ZMV5 832 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 DHX36Q9H2U1 1008 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 NOC2LQ9Y3T9 749 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 CTDP1Q9Y5B0 961 aaPredicted RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 FAM107AO95990 144 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 AFPP02771 609 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 ITGA4P13612 1032 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 ZNF844Q08AG5 666 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 GIT2Q14161 759 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 POTEAQ6S8J7 498 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 FRMD5Q7Z6J6 570 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 YTHDF3Q7Z739 585 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 PPANQ9NQ55 473 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 NENFQ9UMX5 172 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 TRAF3IP3Q9Y228 551 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 GOLGA6L10A6NI86 522 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 TMCO5BA8MYB1 307 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 GCOM1H8Y6P7 765 aaPredicted RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 PGRMC1O00264 195 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 MYZAPP0CAP1 466 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 RFC4P35249 363 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 EXOC3L4Q17RC7 722 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
ERBB3-214ENST00000550070 CATSPER3Q86XQ3 398 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 CEP89Q96ST8 783 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.22□□□□□ -0.611e-8■■■□□ 14.7
ERBB3-214ENST00000550070 PITPNM2Q9BZ72 1349 aa11.22□□□□□ -0.61
ERBB3-214ENST00000550070 DDX4Q9NQI0 724 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms