RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 ANO3Q9BYT9 981 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 NAP1L2Q9ULW6 460 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 USP15Q9Y4E8 981 aaPredicted RBP13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 PCDHB12Q9Y5F1 795 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 SQORQ9Y6N5 450 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 NFASCO94856 1347 aa13.63□□□□□ -0.23
TRAFD1-205ENST00000548277 SP100P23497 879 aaPredicted RBP13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 SARSP49591 514 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 ADCY7P51828 1080 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 ERVFC1P60507 584 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 APOBRQ0VD83 1088 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 CEP55Q53EZ4 464 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 IER5LQ5T953 404 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 JAKMIP3Q5VZ66 844 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 SWSAP1Q6NVH7 229 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 PLA2G4DQ86XP0 818 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 THNSL1Q8IYQ7 743 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 NME8Q8N427 588 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 RIC8AQ9NPQ8 531 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 ANO2Q9NQ90 1003 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 ZNF302Q9NR11 478 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 TYW1Q9NV66 732 aaKnown RBP13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 ST3GAL5Q9UNP4 418 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 CNTNAP5Q8WYK1 1306 aa13.62□□□□□ -0.23
TRAFD1-205ENST00000548277 TMEM221A6NGB7 291 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 M0R296 226 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 HBP1O60381 514 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 ATG7O95352 703 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 EYA4O95677 639 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 CCNE2O96020 404 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 VTNP04004 478 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 RPLP2P05387 115 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 FGFR1P11362 822 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 NECTIN1Q15223 517 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 KIZQ2M2Z5 673 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 PLPP4Q5VZY2 271 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 FAM160B1Q5W0V3 765 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 LLGL2Q6P1M3 1020 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 ABHD15Q6UXT9 468 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 TRIM67Q6ZTA4 783 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 CCDC60Q8IWA6 550 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 KIAA0319LQ8IZA0 1049 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 METTL13Q8N6R0 699 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 SMRP1Q8NCR6 262 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 ZNF668Q96K58 619 aaPredicted RBP13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 OSMRQ99650 979 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 ESYT1Q9BSJ8 1104 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 ERVK-5Q9HDB9 667 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 BRPF3Q9ULD4 1205 aa13.61□□□□□ -0.23
TRAFD1-205ENST00000548277 MEIS1O00470 390 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 FGF18O76093 207 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 ATP4AP20648 1035 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 ZXDAP98168 799 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 COASYQ13057 564 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 RTN1Q16799 776 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 APOA5Q6Q788 366 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 SKAP1Q86WV1 359 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 COLGALT1Q8NBJ5 622 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 PRSS33Q8NF86 280 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 VN1R2Q8NFZ6 395 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 ATP6V0A4Q9HBG4 840 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 TLR9Q9NR96 1032 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 AAASQ9NRG9 546 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 KDM3AQ9Y4C1 1321 aa13.6□□□□□ -0.23
TRAFD1-205ENST00000548277 KMT2EQ8IZD2 1858 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 LOC730098B7Z3J9 87 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 C9IYK1 514 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 FAM86B1E9PN63 330 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 ADAMTS3O15072 1205 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 GPR182O15218 404 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 ZBTB43O43298 467 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 FOSP01100 380 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 FAM86B2P0C5J1 330 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 PBX3P40426 434 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 TECP42680 631 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 ZNF484Q5JVG2 852 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 MIS18BP1Q6P0N0 1132 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 SLC24A5Q71RS6 500 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 SGMS1Q86VZ5 419 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 FAM228AQ86W67 206 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 RNF169Q8NCN4 708 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 ATP8B4Q8TF62 1192 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 NEK1Q96PY6 1258 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 CWH43Q9H720 699 aa13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-205ENST00000548277 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 CDC27P30260 824 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 CA8P35219 290 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 SLC26A2P50443 739 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 DUSP6Q16828 381 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 SUGP1Q8IWZ8 645 aaKnown RBP13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 ZNF577Q9BSK1 485 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 KCNH6Q9H252 994 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
TRAFD1-205ENST00000548277 C1orf112Q9NSG2 853 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms