RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 DDX19AQ9NUU7 478 aaKnown RBP25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 NOD1Q9Y239 953 aa25.9■■□□□ 1.74
SMARCD1-203ENST00000547247 PDE4DIPQ5VU43 2346 aa25.89■■□□□ 1.74
SMARCD1-203ENST00000547247 TMEM150BA6NC51 233 aa25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 ZNF200P98182 395 aaPredicted RBP25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 MTERF2Q49AM1 385 aa25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 KCTD17Q8N5Z5 321 aa25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 RASSF8Q8NHQ8 419 aa25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 ANKEF1Q9NU02 776 aa25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 TUBE1Q9UJT0 475 aa25.89■■□□□ 1.73
SMARCD1-203ENST00000547247 ZBTB42B2RXF5 422 aa25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 TREHO43280 583 aa25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 CD4P01730 458 aa25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 GRB10Q13322 594 aa25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 TARBP2Q15633 366 aaKnown RBP25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 PLA2G4FQ68DD2 849 aa25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 CYP26B1Q9NR63 512 aa25.88■■□□□ 1.73
SMARCD1-203ENST00000547247 A0A087WWV3 80 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 XKR9Q5GH70 373 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 MARCH8Q5T0T0 291 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 ADALQ6DHV7 355 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 SHC4Q6S5L8 630 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 CEP170P1Q96L14 293 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 CCDC43Q96MW1 224 aaKnown RBP25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 PNMA5Q96PV4 448 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 SH2D3AQ9BRG2 576 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 CCDC39Q9UFE4 941 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 DNM3Q9UQ16 869 aa25.87■■□□□ 1.73
SMARCD1-203ENST00000547247 MBLAC1A4D2B0 266 aaPredicted RBP25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 KLRC1P26715 233 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 NPEPPSP55786 919 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 FAAP100Q0VG06 881 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 KARSQ15046 597 aaKnown RBP25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 PLIN2Q99541 437 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 DBR1Q9UK59 544 aaKnown RBP25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 PPME1Q9Y570 386 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 TBC1D8BQ0IIM8 1120 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 CSPP1Q1MSJ5 1256 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 TMEM119Q4V9L6 283 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 MTHFD1LQ6UB35 978 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 CTAGE1Q96RT6 745 aa25.86■■□□□ 1.73
SMARCD1-203ENST00000547247 TRIP12Q14669 1992 aaPredicted RBP25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 MAGEB2O15479 319 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 EVI5O60447 810 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 CLTBP09497 229 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 RARRES1P49788 294 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 PTK7Q13308 1070 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 SERINC5Q86VE9 423 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 CEP89Q96ST8 783 aa25.85■■□□□ 1.73
SMARCD1-203ENST00000547247 E9PMD0 336 aa25.84■■□□□ 1.73
SMARCD1-203ENST00000547247 C22orf31O95567 290 aa25.84■■□□□ 1.73
SMARCD1-203ENST00000547247 RESP18Q5W5W9 173 aa25.84■■□□□ 1.73
SMARCD1-203ENST00000547247 FAM13BQ9NYF5 915 aa25.84■■□□□ 1.73
SMARCD1-203ENST00000547247 PCDHA2Q9Y5H9 948 aa25.84■■□□□ 1.73
SMARCD1-203ENST00000547247 EYA4O95677 639 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 CYP2C9P11712 490 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 PLCG1P19174 1290 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 TAF2Q6P1X5 1199 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 KCNK18Q7Z418 384 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 EXOC8Q8IYI6 725 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 ZBTB10Q96DT7 871 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 BHMT2Q9H2M3 363 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 TMEM39AQ9NV64 488 aa25.83■■□□□ 1.73
SMARCD1-203ENST00000547247 ARHGEF35A5YM69 484 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 MAFO75444 373 aaPredicted RBP25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 CMA1P23946 247 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 RFC5P40937 340 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 RRAGBQ5VZM2 374 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 C7orf61Q8IZ16 206 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 RETREG2Q8NC44 543 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 SLC7A3Q8WY07 619 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 JPH2Q9BR39 696 aaPredicted RBP25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 PDLIM7Q9NR12 457 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 SMIM35A0A1B0GVV1 85 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 GOLGA6L4A6NEF3 574 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 POLGP54098 1239 aaPredicted RBP25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 CCDC73Q6ZRK6 1079 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 METTL13Q8N6R0 699 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 PANK2Q9BZ23 570 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 DHX33Q9H6R0 707 aaKnown RBP25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 TBX21Q9UL17 535 aa25.82■■□□□ 1.72
SMARCD1-203ENST00000547247 A0A1W2PQ27 194 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 A0A1W2PQ64 194 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 A0A1W2PQD8 194 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 EFCAB12Q6NXP0 572 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 RUFY4Q6ZNE9 571 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 CLEC17AQ6ZS10 378 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 PDILTQ8N807 584 aa25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 PRDM5Q9NQX1 630 aaPredicted RBP25.81■■□□□ 1.72
SMARCD1-203ENST00000547247 IGKV6-21A0A0C4DH24 114 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 DGAT1O75907 488 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 TMOD1P28289 359 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 CCDC155Q8N6L0 562 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 CAGE1Q8TC20 777 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 DHX38Q92620 1227 aaKnown RBP25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 SUGCTQ9HAC7 445 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 STK17AQ9UEE5 414 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 PRKAG2Q9UGJ0 569 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 NR2E3Q9Y5X4 410 aa25.8■■□□□ 1.72
SMARCD1-203ENST00000547247 A0A087X0B3 334 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms