RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 KCTD10Q9H3F6 313 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 ARFGAP3Q9NP61 516 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 LTBP1Q14766 1721 aa13.96□□□□□ -0.17
SCAF11-209ENST00000547018 MOB2Q70IA6 237 aa13.96□□□□□ -0.18
SCAF11-209ENST00000547018 FAM160B2Q86V87 743 aa13.96□□□□□ -0.18
SCAF11-209ENST00000547018 NRXN2Q9P2S2 1712 aa13.96□□□□□ -0.18
SCAF11-209ENST00000547018 A0A087X0T9 212 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 DDNO94850 711 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 FAM228BP0C875 321 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 ITGB3BPQ13352 177 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 FAM186BQ8IYM0 893 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 SYTL5Q8TDW5 730 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 COG1Q8WTW3 980 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 MXRA8Q9BRK3 442 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 PCDHA2Q9Y5H9 948 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 HARSP12081 509 aaKnown RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 MRPS9P82933 396 aaKnown RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 MKRN3Q13064 507 aaKnown RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 UGCGQ16739 394 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 CRYGNQ8WXF5 182 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 NACC1Q96RE7 527 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 DDX41Q9UJV9 622 aaKnown RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 ZNF536O15090 1300 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 PHF20L1A8MW92 1017 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 CALUO43852 315 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-209ENST00000547018 TLR2O60603 784 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 ICAM1P05362 532 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 EHHADHQ08426 723 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 ASIC2Q16515 512 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 ZCWPW2Q504Y3 356 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 PDXDC1Q6P996 788 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 FAM83AQ86UY5 434 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 TEPSINQ96N21 525 aa13.95□□□□□ -0.18
SCAF11-209ENST00000547018 TACC1O75410 805 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
SCAF11-209ENST00000547018 AFPP02771 609 aaKnown RBP13.94□□□□□ -0.18
SCAF11-209ENST00000547018 TKFCQ3LXA3 575 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 SEPT14Q6ZU15 432 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 CYFIP1Q7L576 1253 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 TRIM59Q8IWR1 403 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 KRT222Q8N1A0 295 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 SAAL1Q96ER3 474 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 OGFRQ9NZT2 677 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 NOL4O94818 638 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 TUBB4AP04350 444 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 VAV2P52735 878 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 VSNL1P62760 191 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 CEP112Q8N8E3 955 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 BAP1Q92560 729 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 CCDC102AQ96A19 550 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 ZNF408Q9H9D4 720 aa13.94□□□□□ -0.18
SCAF11-209ENST00000547018 PDE2AO00408 941 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 RPL13P26373 211 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 GCLMP48507 274 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 ADAT2Q7Z6V5 191 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 RETREG2Q8NC44 543 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 U2AF1L4Q8WU68 220 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 ABCB6Q9NP58 842 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 AJAP1Q9UKB5 411 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 TBX3O15119 743 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 CIITAP33076 1130 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 BMS1Q14692 1282 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 CBWD1Q9BRT8 395 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 ACP6Q9NPH0 428 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 FRMD4BQ9Y2L6 1034 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 ASTN1O14525 1302 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 EIF3CLB5ME19 914 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 TGFB1I1O43294 461 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 SASH3O75995 380 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 PTK2Q05397 1052 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 LMBRD2Q68DH5 695 aaPredicted RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 C1orf186Q6ZWK4 172 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 PHLDB2Q86SQ0 1253 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 GPR161Q8N6U8 529 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 CLEC4DQ8WXI8 215 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 EIF3CQ99613 913 aaKnown RBP13.93□□□□□ -0.18
SCAF11-209ENST00000547018 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
SCAF11-209ENST00000547018 PPP1R12BO60237 982 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 UCHL3P15374 230 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 H2AFXP16104 143 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 KLRC1P26715 233 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 DLG4P78352 724 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 TAF3Q5VWG9 929 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 ZNF746Q6NUN9 644 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 NLRX1Q86UT6 975 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 SLC5A5Q92911 643 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 POP1Q99575 1024 aaKnown RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 TMEM110-MUSTN1A8MSY1 372 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 CALCAP01258 141 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 DLATP10515 647 aaKnown RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 PTGER2P43116 358 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
SCAF11-209ENST00000547018 LONRF2Q1L5Z9 754 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 HYIQ5T013 277 aa13.92□□□□□ -0.18
SCAF11-209ENST00000547018 GADL1Q6ZQY3 521 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms