RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 RPN1P04843 607 aaKnown RBP18.19■□□□□ 0.5
BRF1-208ENST00000546997 HTRA3P83110 453 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 PPP2R5CQ13362 524 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 STXBP2Q15833 593 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 KRT79Q5XKE5 535 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 PNMA5Q96PV4 448 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 EPC1Q9H2F5 836 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 ZFYVE28Q9HCC9 887 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
BRF1-208ENST00000546997 KIF5CO60282 957 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 CORO7P57737 925 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 TTC31Q49AM3 519 aaPredicted RBP18.18■□□□□ 0.5
BRF1-208ENST00000546997 KLHL10Q6JEL2 608 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 B3GNT9Q6UX72 402 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 PLCD3Q8N3E9 789 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 GPRASP2Q96D09 838 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 RIT2Q99578 217 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 UNC45AQ9H3U1 944 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 PDE11AQ9HCR9 933 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 KBTBD4Q9NVX7 518 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 RMND1Q9NWS8 449 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 VPS18Q9P253 973 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 IVNS1ABPQ9Y6Y0 642 aa18.18■□□□□ 0.5
BRF1-208ENST00000546997 MYL1P05976 194 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 MAPK4P31152 587 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 PDE4DQ08499 809 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 GRB14Q14449 540 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 WHAMMP3Q1A5X7 153 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 HSP90B2PQ58FF3 399 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 ZNF658Q5TYW1 1059 aaPredicted RBP18.17■□□□□ 0.5
BRF1-208ENST00000546997 TOGARAM2Q6ZUX3 1019 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 ABRAQ8N0Z2 381 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 CUEDC2Q9H467 287 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 SYNRGQ9UMZ2 1314 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 POTEB3A0JP26 581 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 CA12O43570 354 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 STRNO43815 780 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 MED24O75448 989 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 STAM2O75886 525 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
BRF1-208ENST00000546997 GTF2A1P52655 376 aaPredicted RBP18.17■□□□□ 0.5
BRF1-208ENST00000546997 STX17P56962 302 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 ZNF792Q3KQV3 632 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 POTEBQ6S5H4 581 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 EEPD1Q7L9B9 569 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 KCNK18Q7Z418 384 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 PLEKHH3Q7Z736 793 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 NLRX1Q86UT6 975 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 CCDC51Q96ER9 411 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 CALML4Q96GE6 196 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 TEKT3Q9BXF9 490 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 BCAS3Q9H6U6 928 aa18.17■□□□□ 0.5
BRF1-208ENST00000546997 SPATA31C1P0DKV0 1188 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 FECHP22830 423 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 MCM3P25205 808 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 NR1I3Q14994 352 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 TMEM119Q4V9L6 283 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 WDR93Q6P2C0 686 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 SEPT14Q6ZU15 432 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 CATSPER3Q86XQ3 398 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 MAGEF1Q9HAY2 307 aa18.16■□□□□ 0.5
BRF1-208ENST00000546997 SPATA31C2B4DYI2 1134 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 AKR1B15C9JRZ8 316 aaPredicted RBP18.15■□□□□ 0.5
BRF1-208ENST00000546997 KCNA2P16389 499 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 CYP4A11Q02928 519 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 GNPTABQ3T906 1256 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 SUGP1Q8IWZ8 645 aaKnown RBP18.15■□□□□ 0.5
BRF1-208ENST00000546997 CDK5RAP3Q96JB5 506 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 BLOC1S4Q9NUP1 217 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 ADGRG1Q9Y653 693 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 AARSP49588 968 aaKnown RBP eCLIP18.15■□□□□ 0.5
BRF1-208ENST00000546997 SP2Q02086 613 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 KCNB1Q14721 858 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 HYIQ5T013 277 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 CDKAL1Q5VV42 579 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 HAUS3Q68CZ6 603 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 POTEGQ6S5H5 508 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 EFCAB13Q8IY85 973 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 EIF2AK1Q9BQI3 630 aaKnown RBP18.15■□□□□ 0.5
BRF1-208ENST00000546997 TBC1D22BQ9NU19 505 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 RGL1Q9NZL6 768 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 HTTP42858 3142 aa18.15■□□□□ 0.5
BRF1-208ENST00000546997 THSD7BQ9C0I4 1608 aa18.14■□□□□ 0.5
BRF1-208ENST00000546997 A0A1B0GTH6 734 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 EIF3CLB5ME19 914 aaKnown RBP18.14■□□□□ 0.49
BRF1-208ENST00000546997 MAFGO15525 162 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 KLRC4O43908 158 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 PPFIA4O75335 1185 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 CCNE2O96020 404 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 APTXQ7Z2E3 356 aaKnown RBP18.14■□□□□ 0.49
BRF1-208ENST00000546997 FBXO16Q8IX29 292 aaPredicted RBP18.14■□□□□ 0.49
BRF1-208ENST00000546997 ERMNQ8TAM6 284 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 KCNV2Q8TDN2 545 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 MORC4Q8TE76 937 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 RNF25Q96BH1 459 aaPredicted RBP18.14■□□□□ 0.49
BRF1-208ENST00000546997 EIF3CQ99613 913 aaKnown RBP18.14■□□□□ 0.49
BRF1-208ENST00000546997 HSD17B14Q9BPX1 270 aa18.14■□□□□ 0.49
BRF1-208ENST00000546997 RWDD2AQ9UIY3 292 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms