RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 ARHGAP4P98171 946 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 STK4Q13043 487 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 TRIM32Q13049 653 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 SLC18A3Q16572 532 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 CALCRLQ16602 461 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 TXNRD1Q16881 649 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 SFMBT2Q5VUG0 894 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 HAUS3Q68CZ6 603 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 MOXD1Q6UVY6 613 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 RUFY4Q6ZNE9 571 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 LRRC55Q6ZSA7 311 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 C16orf86Q6ZW13 317 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 CACNA2D4Q7Z3S7 1137 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 HEATR3Q7Z4Q2 680 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 C2CD5Q86YS7 1000 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 CCDC50Q8IVM0 306 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 GLYCTKQ8IVS8 523 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 CCDC65Q8IXS2 484 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 MYOCDQ8IZQ8 938 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 SYCE1Q8N0S2 351 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 MICALL1Q8N3F8 863 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 GIPC2Q8TF65 315 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ZNF384Q8TF68 577 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ATRIPQ8WXE1 791 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 RAD54LQ92698 747 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 TAF4BQ92750 862 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 STAMQ92783 540 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 VTI1AQ96AJ9 217 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 MRGPRX2Q96LB1 330 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-225ENST00000545920 HINFPQ9BQA5 517 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 FAM129AQ9BZQ8 928 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 RIOX1Q9H6W3 641 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 PLCB1Q9NQ66 1216 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ARHGAP20Q9P2F6 1191 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 HDAC6Q9UBN7 1215 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 LRWD1Q9UFC0 647 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 DCTN4Q9UJW0 460 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 SUGT1Q9Y2Z0 365 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 ATP6V0A2Q9Y487 856 aa7.1□□□□□ -1.27
SNHG1-225ENST00000545920 MACROD2A1Z1Q3 448 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 GTPBP10A4D1E9 387 aaKnown RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 FAM181BA6NEQ2 426 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 SMCO2A6NFE2 343 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 J3QL48 77 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ZNF263O14978 683 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 CCNT1O60563 726 aaKnown RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 PHACTR2O75167 634 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 LGR5O75473 907 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 FSBPO95073 299 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 MYCP01106 439 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 GUCY2CP25092 1073 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 HMGB2P26583 209 aaKnown RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 INPP5BP32019 993 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 EIF3BP55884 814 aaKnown RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ERVK-9P63128 1117 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 DDB1Q16531 1140 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 CDC37Q16543 378 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ZCWPW2Q504Y3 356 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 FAM47AQ5JRC9 791 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 AGBL2Q5U5Z8 902 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 RRAGAQ7L523 313 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ZNF804AQ7Z570 1209 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 VPS36Q86VN1 386 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 KIAA0895Q8NCT3 520 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ACTRT1Q8TDG2 376 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 BCAS4Q8TDM0 211 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 TBC1D22AQ8WUA7 517 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 CAPZA3Q96KX2 299 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 NAP1L3Q99457 506 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 TMEM47Q9BQJ4 181 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 TLR10Q9BXR5 811 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 EPN3Q9H201 632 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 SEMA6BQ9H3T3 888 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 SLITRK6Q9H5Y7 841 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 MMRN2Q9H8L6 949 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ACTR5Q9H9F9 607 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 METTL14Q9HCE5 456 aaKnown RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 IL17RBQ9NRM6 502 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 ZNF358Q9NW07 568 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 TRIM10Q9UDY6 481 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 LCMT1Q9UIC8 334 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 TMEM59LQ9UK28 342 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 TTC7AQ9ULT0 858 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-225ENST00000545920 FAM169AQ9Y6X4 670 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 MYH2Q9UKX2 1941 aa7.09□□□□□ -1.27
SNHG1-225ENST00000545920 A0A1B0GUL6 1792 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CASZ1Q86V15 1759 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 GRIN2DO15399 1336 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 IRS2Q9Y4H2 1338 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CYP2D7A0A087X1C5 515 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 hCG_1642624A0A1W2PR95 340 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 LRRC53A6NM62 1247 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 TMEM229AB2RXF0 380 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 SLC16A3O15427 465 aaKnown RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 MEFVO15553 781 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-225ENST00000545920 CYTH3O43739 400 aa7.08□□□□□ -1.28
SNHG1-225ENST00000545920 FLOT1O75955 427 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms