RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SCYL1Q96KG9 808 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 CLUHP3Q96NS8 147 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 OR10A5Q9H207 317 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 CDC42EP3Q9UKI2 254 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 TCAF1Q9Y4C2 921 aa7.15□□□□□ -1.26
SNHG1-224ENST00000545688 HIP1RO75146 1068 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 ZBTB48P10074 688 aaPredicted RBP7.14□□□□□ -1.27
SNHG1-224ENST00000545688 SDHAP31040 664 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 RAC3P60763 192 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 R3HDM1Q15032 1099 aaKnown RBP7.14□□□□□ -1.27
SNHG1-224ENST00000545688 TBR1Q16650 682 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 CATSPEREQ5SY80 951 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 OTOP2Q7RTS6 562 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 TAX1BP1Q86VP1 789 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 WDR48Q8TAF3 677 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 CDK5RAP1Q96SZ6 601 aaKnown RBP7.14□□□□□ -1.27
SNHG1-224ENST00000545688 TMPRSS5Q9H3S3 457 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 KANSL2Q9H9L4 492 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 ASB1Q9Y576 335 aa7.14□□□□□ -1.27
SNHG1-224ENST00000545688 MECP2P51608 486 aaKnown RBP7.13□□□□□ -1.27
SNHG1-224ENST00000545688 EIF4HQ15056 248 aaKnown RBP7.13□□□□□ -1.27
SNHG1-224ENST00000545688 OTOP1Q7RTM1 612 aa7.13□□□□□ -1.27
SNHG1-224ENST00000545688 DPYSL5Q9BPU6 564 aa7.13□□□□□ -1.27
SNHG1-224ENST00000545688 BOCQ9BWV1 1114 aa7.13□□□□□ -1.27
SNHG1-224ENST00000545688 OAZ3Q9UMX2 235 aa7.13□□□□□ -1.27
SNHG1-224ENST00000545688 ZFR2Q9UPR6 939 aaKnown RBP7.13□□□□□ -1.27
SNHG1-224ENST00000545688 NR2E1Q9Y466 385 aa7.13□□□□□ -1.27
SNHG1-224ENST00000545688 A0A0G2JNJ9 132 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 GOLGA6L22H0YM25 854 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 M0R2C6 588 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 MATN2O00339 956 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 MUSKO15146 869 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 GLRX3O76003 335 aaKnown RBP7.12□□□□□ -1.27
SNHG1-224ENST00000545688 KRT37O76014 449 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 ZXDAP98168 799 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 MOGSQ13724 837 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 FNDC3BQ53EP0 1204 aaKnown RBP7.12□□□□□ -1.27
SNHG1-224ENST00000545688 TMEM200BQ69YZ2 307 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 ZCCHC8Q6NZY4 707 aaKnown RBP7.12□□□□□ -1.27
SNHG1-224ENST00000545688 DDX53Q86TM3 631 aaKnown RBP7.12□□□□□ -1.27
SNHG1-224ENST00000545688 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 ERCC4Q92889 916 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-224ENST00000545688 MRFAP1L1Q96HT8 127 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 ZSWIM4Q9H7M6 989 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 SAMD15Q9P1V8 674 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 Q9UFV3 132 aa7.12□□□□□ -1.27
SNHG1-224ENST00000545688 ARHGAP6O43182 974 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 DNAJC8O75937 253 aaPredicted RBP7.11□□□□□ -1.27
SNHG1-224ENST00000545688 CR2P20023 1033 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 IGFALSP35858 605 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 NFYCQ13952 458 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 ZNF460Q14592 562 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 PCOLCEQ15113 449 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 AGBL4Q5VU57 503 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 TRIM68Q6AZZ1 485 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 GRAMD4Q6IC98 578 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 FILIP1Q7Z7B0 1213 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 FUKQ8N0W3 1084 aa7.11□□□□□ -1.27
SNHG1-224ENST00000545688 TNPO3Q9Y5L0 923 aaKnown RBP7.11□□□□□ -1.27
SNHG1-224ENST00000545688 B4E1Z4 1266 aa7.1□□□□□ -1.27
SNHG1-224ENST00000545688 PPP1R12AO14974 1030 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-224ENST00000545688 CDC14BO60729 498 aa7.1□□□□□ -1.27
SNHG1-224ENST00000545688 MRE11P49959 708 aa7.1□□□□□ -1.27
SNHG1-224ENST00000545688 SPDYAQ5MJ70 313 aa7.1□□□□□ -1.27
SNHG1-224ENST00000545688 CC2D1AQ6P1N0 951 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-224ENST00000545688 RTN4RL1Q86UN2 441 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-224ENST00000545688 CHST14Q8NCH0 376 aa7.1□□□□□ -1.27
SNHG1-224ENST00000545688 CFHR4Q92496 578 aa7.1□□□□□ -1.27
SNHG1-224ENST00000545688 FOXRED1Q96CU9 486 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-224ENST00000545688 DVL2O14641 736 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 OPA1O60313 960 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 ASLP04424 464 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 MEOX1P50221 254 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 STAT5BP51692 787 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 ALDH6A1Q02252 535 aaKnown RBP7.09□□□□□ -1.27
SNHG1-224ENST00000545688 ARHGAP44Q17R89 818 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 HS1BP3Q53T59 392 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 USP30Q70CQ3 517 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 RTKN2Q8IZC4 609 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 CALML6Q8TD86 181 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 C12orf65Q9H3J6 166 aaKnown RBP7.09□□□□□ -1.27
SNHG1-224ENST00000545688 SEMA4AQ9H3S1 761 aa7.09□□□□□ -1.27
SNHG1-224ENST00000545688 RAD17O75943 681 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 SDSP20132 328 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 APEX1P27695 318 aaKnown RBP7.08□□□□□ -1.28
SNHG1-224ENST00000545688 KIF11P52732 1056 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 DUSP8Q13202 625 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 CCDC144BQ3MJ40 725 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 OR14K1Q8NGZ2 314 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 DRC1Q96MC2 740 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 ADOQ96SZ5 270 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 FOXB1Q99853 325 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 PLA2G12BQ9BX93 195 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 OR10A2Q9H208 303 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 TESMINQ9Y4I5 508 aa7.08□□□□□ -1.28
SNHG1-224ENST00000545688 TRAF5O00463 557 aa7.07□□□□□ -1.28
SNHG1-224ENST00000545688 MAFO75444 373 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-224ENST00000545688 COMTP21964 271 aa7.07□□□□□ -1.28
SNHG1-224ENST00000545688 PIK3R6Q5UE93 754 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms