RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
PDZD4-209ENST00000544474 FAM83BQ5T0W9 1011 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 TEX9Q8N6V9 391 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 CCT6BQ92526 530 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 RUBCNQ92622 972 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 ECT2Q9H8V3 914 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 ARHGEF10LQ9HCE6 1279 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 PCDHB13Q9Y5F0 798 aa13.9□□□□□ -0.18
PDZD4-209ENST00000544474 PPIP5K2O43314 1243 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 MYL1P05976 194 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 CHRNDQ07001 517 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 ERFEQ4G0M1 354 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 UBAP2Q5T6F2 1119 aaKnown RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 MIPOL1Q8TD10 442 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 TNFRSF25Q93038 417 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 CNKSR1Q969H4 720 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 FAM118BQ9BPY3 351 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 METTL5Q9NRN9 209 aaKnown RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 TMEM260Q9NX78 707 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 CCND1P24385 295 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 ASIC2Q16515 512 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 SV2BQ7L1I2 683 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 SDCCAG8Q86SQ7 713 aaPredicted RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 LMNTD2Q8IXW0 634 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 EPS8L3Q8TE67 593 aaKnown RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 SEMA6BQ9H3T3 888 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 TCP11X1B4DZS4 312 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 TRAPPC3O43617 180 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 OATP04181 439 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 SLURP2P0DP57 97 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 KCNJ1P48048 391 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 ITPK1Q13572 414 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 NPY5RQ15761 445 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 DENND2CQ68D51 928 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 GIMAP8Q8ND71 665 aaPredicted RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 SNX29Q8TEQ0 813 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 CELF1Q92879 486 aaKnown RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 TSG101Q99816 390 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 TMBIM4Q9HC24 238 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 NOC2LQ9Y3T9 749 aaKnown RBP13.89□□□□□ -0.19
PDZD4-209ENST00000544474 NR2E1Q9Y466 385 aa13.89□□□□□ -0.19
PDZD4-209ENST00000544474 CFAP73A6NFT4 308 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 CCT8L1PA6NM43 557 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 CLIC2O15247 247 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 RHOBTB3O94955 611 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 ALDH3A1P30838 453 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 NKX1-1Q15270 411 aaPredicted RBP13.88□□□□□ -0.19
PDZD4-209ENST00000544474 NAALADL2Q58DX5 795 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 DTNBP1Q96EV8 351 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 SUGT1Q9Y2Z0 365 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 WDR91A4D1P6 747 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 SFI1A8K8P3 1242 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 LRRN2O75325 713 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 ABL2P42684 1182 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 LONRF1Q17RB8 773 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 NAF1Q96HR8 494 aaKnown RBP13.88□□□□□ -0.19
PDZD4-209ENST00000544474 TMEM237Q96Q45 408 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 FMO2Q99518 471 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 MMTAG2Q9BU76 263 aaKnown RBP13.88□□□□□ -0.19
PDZD4-209ENST00000544474 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
PDZD4-209ENST00000544474 PCDHA4Q9UN74 947 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 AKAP11Q9UKA4 1901 aa13.88□□□□□ -0.19
PDZD4-209ENST00000544474 USP17L8P0C7I0 530 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 LACTBP83111 547 aaPredicted RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 DYNC1I2Q13409 638 aaKnown RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 SLC29A2Q14542 456 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 DTX3LQ8TDB6 740 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 BICD1Q96G01 975 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 NGLY1Q96IV0 654 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 XPO6Q96QU8 1125 aaKnown RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 TRIM9Q9C026 710 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 ETNK1Q9HBU6 452 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 PLAGL2Q9UPG8 496 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 ANKRD62A6NC57 917 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 MEIS1O00470 390 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 GFPT2O94808 682 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 CREB1P16220 341 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 PLCG2P16885 1265 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 CNNM4Q6P4Q7 775 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 DNAAF2Q9NVR5 837 aaKnown RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 AGAP1Q9UPQ3 857 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
PDZD4-209ENST00000544474 LOC102724428A0A0B4J2F2 783 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 PIAS1O75925 651 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 SLC9A1P19634 815 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 PRDX5P30044 214 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 SIK1P57059 783 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 ATP11AP98196 1134 aa13.87□□□□□ -0.19
PDZD4-209ENST00000544474 DIXDC1Q155Q3 683 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms