RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 MAFAQ8NHW3 353 aaPredicted RBP21.53■■□□□ 1.04
SPPL3-208ENST00000543854 FAM20AQ96MK3 541 aa21.53■■□□□ 1.04
SPPL3-208ENST00000543854 FAM205CA6NFA0 338 aa21.52■■□□□ 1.04
SPPL3-208ENST00000543854 ZNF862O60290 1169 aa21.52■■□□□ 1.04
SPPL3-208ENST00000543854 MARCH6O60337 910 aa21.52■■□□□ 1.04
SPPL3-208ENST00000543854 C22orf31O95567 290 aa21.52■■□□□ 1.04
SPPL3-208ENST00000543854 SAFBQ15424 915 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPPL3-208ENST00000543854 B3GNT9Q6UX72 402 aa21.52■■□□□ 1.04
SPPL3-208ENST00000543854 USP38Q8NB14 1042 aa21.52■■□□□ 1.04
SPPL3-208ENST00000543854 BTBD18B2RXH4 712 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 TBX3O15119 743 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 PPP2R5CQ13362 524 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 FAM117BQ6P1L5 589 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 POTEDQ86YR6 584 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 FAM184AQ8NB25 1140 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 IL27Q8NEV9 243 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 C8orf76Q96K31 380 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 RAD9AQ99638 391 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 CELF4Q9BZC1 486 aaKnown RBP21.51■■□□□ 1.03
SPPL3-208ENST00000543854 NRBP2Q9NSY0 501 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 VAV3Q9UKW4 847 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 SQORQ9Y6N5 450 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 MYO9BQ13459 2157 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 KDM3AQ9Y4C1 1321 aa21.51■■□□□ 1.03
SPPL3-208ENST00000543854 LCHNA4D1U4 455 aa21.5■■□□□ 1.03
SPPL3-208ENST00000543854 MAGEB2O15479 319 aa21.5■■□□□ 1.03
SPPL3-208ENST00000543854 TAP1Q03518 808 aa21.5■■□□□ 1.03
SPPL3-208ENST00000543854 METTL13Q8N6R0 699 aa21.5■■□□□ 1.03
SPPL3-208ENST00000543854 SEPT9Q9UHD8 586 aaPredicted RBP21.5■■□□□ 1.03
SPPL3-208ENST00000543854 GINS2Q9Y248 185 aa21.5■■□□□ 1.03
SPPL3-208ENST00000543854 EVPLQ92817 2033 aa21.5■■□□□ 1.03
SPPL3-208ENST00000543854 LOXHD1Q8IVV2 1947 aa21.49■■□□□ 1.03
SPPL3-208ENST00000543854 GUCY1B3Q02153 619 aa21.49■■□□□ 1.03
SPPL3-208ENST00000543854 PAK2Q13177 524 aa21.49■■□□□ 1.03
SPPL3-208ENST00000543854 SLFN12Q8IYM2 578 aa21.49■■□□□ 1.03
SPPL3-208ENST00000543854 KIAA0319LQ8IZA0 1049 aa21.49■■□□□ 1.03
SPPL3-208ENST00000543854 AGO3Q9H9G7 860 aaKnown RBP21.49■■□□□ 1.03
SPPL3-208ENST00000543854 INSL6Q9Y581 213 aa21.49■■□□□ 1.03
SPPL3-208ENST00000543854 PRUNE2Q8WUY3 3088 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.48■■□□□ 1.03
SPPL3-208ENST00000543854 ARHGEF15O94989 841 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 BAG4O95429 457 aaKnown RBP21.48■■□□□ 1.03
SPPL3-208ENST00000543854 CD52P31358 61 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 HAS1Q92839 578 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 TBC1D32Q96NH3 1257 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 MAP7D2Q96T17 732 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 YME1L1Q96TA2 773 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 CERS4Q9HA82 394 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 UNC80Q8N2C7 3258 aa21.48■■□□□ 1.03
SPPL3-208ENST00000543854 COL4A4P53420 1690 aaPredicted RBP21.47■■□□□ 1.03
SPPL3-208ENST00000543854 COL4A6Q14031 1691 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 NEMFO60524 1076 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 TMOD1P28289 359 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 CLCN3P51790 818 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 PSMC5P62195 406 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 TBC1D8BQ0IIM8 1120 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 XKR3Q5GH77 459 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 BANK1Q8NDB2 785 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 ARNTL2Q8WYA1 636 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 TOP1MTQ969P6 601 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 FTHL17Q9BXU8 183 aa21.47■■□□□ 1.03
SPPL3-208ENST00000543854 EML1O00423 815 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 DKC1O60832 514 aaKnown RBP eCLIP21.46■■□□□ 1.035e-9■■■■■ 40.8
SPPL3-208ENST00000543854 UPP2O95045 317 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 VTNP04004 478 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 IGFBP4P22692 258 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 HTRA4P83105 476 aaPredicted RBP21.46■■□□□ 1.03
SPPL3-208ENST00000543854 GNL2Q13823 731 aaKnown RBP21.46■■□□□ 1.03
SPPL3-208ENST00000543854 ADGRE1Q14246 886 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 CALCRLQ16602 461 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 KIZQ2M2Z5 673 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 EFCAB12Q6NXP0 572 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 SLC17A8Q8NDX2 589 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 PPP1R16BQ96T49 567 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 PADI3Q9ULW8 664 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 AKT3Q9Y243 479 aa21.46■■□□□ 1.03
SPPL3-208ENST00000543854 TRANK1O15050 2925 aa21.45■■□□□ 1.03
SPPL3-208ENST00000543854 LINC01553A4QN01 128 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 QARSP47897 775 aaKnown RBP21.45■■□□□ 1.02
SPPL3-208ENST00000543854 MTERF2Q49AM1 385 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 ODR4Q5SWX8 454 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 NCAPH2Q6IBW4 605 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 LRRC71Q8N4P6 559 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 FBXO18Q8NFZ0 1043 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 NIFKQ9BYG3 293 aaKnown RBP21.45■■□□□ 1.02
SPPL3-208ENST00000543854 FOXP1Q9H334 677 aaPredicted RBP21.45■■□□□ 1.02
SPPL3-208ENST00000543854 KIF3AQ9Y496 699 aa21.45■■□□□ 1.02
SPPL3-208ENST00000543854 RPS6KA5O75582 802 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 MCM2P49736 904 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 CRYBB1P53674 252 aaPredicted RBP21.44■■□□□ 1.02
SPPL3-208ENST00000543854 SPIRE1Q08AE8 756 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 TARBP2Q15633 366 aaKnown RBP21.44■■□□□ 1.02
SPPL3-208ENST00000543854 TMEM266Q2M3C6 531 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 ZNF710Q8N1W2 664 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 LINC01465Q8N7H1 131 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 SP7Q8TDD2 431 aaPredicted RBP21.44■■□□□ 1.02
SPPL3-208ENST00000543854 TMEM40Q8WWA1 233 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 TGS1Q96RS0 853 aaKnown RBP21.44■■□□□ 1.02
SPPL3-208ENST00000543854 OSMRQ99650 979 aa21.44■■□□□ 1.02
SPPL3-208ENST00000543854 SUGCTQ9HAC7 445 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms