RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CTIFO43310 598 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 PDIA3P30101 505 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 EIF6P56537 245 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 HDLBPQ00341 1268 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 UIMC1Q96RL1 719 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 MOV10L1Q9BXT6 1211 aaKnown RBP20.69■□□□□ 0.9
HDAC4-215ENST00000543185 CALN1Q9BXU9 219 aa20.69■□□□□ 0.9
HDAC4-215ENST00000543185 DHX34Q14147 1143 aaKnown RBP20.68■□□□□ 0.9
HDAC4-215ENST00000543185 OTUD7BQ6GQQ9 843 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 TMED8Q6PL24 325 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-215ENST00000543185 TTC8Q8TAM2 541 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 CEP72Q9P209 647 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 MOCS3O95396 460 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 CCDC15Q0P6D6 951 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 UHMK1Q8TAS1 419 aaKnown RBP20.68■□□□□ 0.9
HDAC4-215ENST00000543185 IRAK4Q9NWZ3 460 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 ORC2Q13416 577 aaPredicted RBP20.68■□□□□ 0.9
HDAC4-215ENST00000543185 ZNF827Q17R98 1081 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 ABHD10Q9NUJ1 306 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 SMG5Q9UPR3 1016 aaKnown RBP20.68■□□□□ 0.9
HDAC4-215ENST00000543185 PFASO15067 1338 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 CCDC127Q96BQ5 260 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 PHACTR3Q96KR7 559 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 PNMA6EA0A0J9YXQ4 647 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 KRT87PA6NCN2 255 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 DDIT3P35638 169 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 SH3GL2Q99962 352 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 GOLPH3LQ9H4A5 285 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 SH3GLB2Q9NR46 395 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 LRRN2O75325 713 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 RSRC2Q7L4I2 434 aaKnown RBP20.68■□□□□ 0.9
HDAC4-215ENST00000543185 OPTNQ96CV9 577 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 TNKSO95271 1327 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 PRDM1O75626 825 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 RAB14P61106 215 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 SNF8Q96H20 258 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 CLIC4Q9Y696 253 aa20.68■□□□□ 0.9
HDAC4-215ENST00000543185 ATP7AQ04656 1500 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 CCNYQ8ND76 341 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 SNX25Q9H3E2 840 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 AGGF1Q8N302 714 aaeCLIP20.67■□□□□ 0.91e-9■■■■□ 24.6
HDAC4-215ENST00000543185 ACRBPQ8NEB7 543 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 FAM89AQ96GI7 184 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 SLC24A3Q9HC58 644 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 LRRIQ4A6NIV6 560 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 CTSWP56202 376 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 SYDE1Q6ZW31 735 aaPredicted RBP20.67■□□□□ 0.9
HDAC4-215ENST00000543185 STAP2Q9UGK3 403 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 FAM95CA0A1B0GW59 222 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 CAPRIN1Q14444 709 aaKnown RBP20.67■□□□□ 0.9
HDAC4-215ENST00000543185 ANGPTL8Q6UXH0 198 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 IFNL3Q8IZI9 196 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 FAM129AQ9BZQ8 928 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 MYH3P11055 1940 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 RSPH10B2B2RC85 870 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 RSPH10BP0C881 870 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 WWP1Q9H0M0 922 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 IL1RAPL1Q9NZN1 696 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 MAN1B1Q9UKM7 699 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 SNX2O60749 519 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 PDCLQ13371 301 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 ATP11CQ8NB49 1132 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 NRBP2Q9NSY0 501 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 PDP2Q9P2J9 529 aa20.67■□□□□ 0.9
HDAC4-215ENST00000543185 MMP1P03956 469 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 AASDHQ4L235 1098 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■□□ 14.7
HDAC4-215ENST00000543185 SLC8A2Q9UPR5 921 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 TBC1D4O60343 1298 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 MYBL1P10243 752 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 HSPA9P38646 679 aaKnown RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 NLRP11P59045 1033 aaKnown RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 OSBPL3Q9H4L5 887 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 PLD3Q8IV08 490 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 SPHKAPQ2M3C7 1700 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 CDC42BPAQ5VT25 1732 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 TESPA1A2RU30 521 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 ADCY3O60266 1144 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 AP3B1O00203 1094 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 POLD1P28340 1107 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 PTPROQ16827 1216 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 ARMCX2Q7L311 632 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 RASSF3Q86WH2 238 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 ZNF579Q8NAF0 562 aaKnown RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 C3orf20Q8ND61 904 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 NDST4Q9H3R1 872 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 QRICH2Q9H0J4 1663 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 ZC3H12BQ5HYM0 836 aaKnown RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 MRPS26Q9BYN8 205 aaKnown RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 ABCF3Q9NUQ8 709 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 WDR70Q9NW82 654 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 MEFVO15553 781 aaPredicted RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 FSD1LQ9BXM9 530 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 TRIM8Q9BZR9 551 aa20.66■□□□□ 0.9
HDAC4-215ENST00000543185 SRPRBQ9Y5M8 271 aaKnown RBP20.66■□□□□ 0.9
HDAC4-215ENST00000543185 UBE3CQ15386 1083 aa20.65■□□□□ 0.9
HDAC4-215ENST00000543185 SNX19Q92543 992 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms