RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 C5AR1P21730 350 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 CD40P25942 277 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 SARSP49591 514 aaKnown RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 GTF2A2P52657 109 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 FAM193AP78312 1265 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 SRSF2Q01130 221 aaKnown RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 PRKCQQ04759 706 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 BNIP3Q12983 259 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 BIRC3Q13489 604 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 LAPTM5Q13571 262 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC9A5Q14940 896 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 GPR19Q15760 415 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 RTP2Q5QGT7 225 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF648Q5T619 568 aaPredicted RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 FSTL4Q6MZW2 842 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 HHIPL2Q6UWX4 724 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 OVCH2Q7RTZ1 564 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 CPNE8Q86YQ8 564 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 MYLK4Q86YV6 388 aaPredicted RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZZZ3Q8IYH5 903 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 CAMKK1Q8N5S9 505 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ATXN2LQ8WWM7 1075 aaKnown RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 DUSP23Q9BVJ7 150 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 SELENOOQ9BVL4 669 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 TMX4Q9H1E5 349 aaPredicted RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZHX3Q9H4I2 956 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZMAT4Q9H898 229 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 SP110Q9HB58 689 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 MKNK2Q9HBH9 465 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 AS3MTQ9HBK9 375 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF277Q9NRM2 450 aaPredicted RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 CLDND1Q9NY35 253 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 FNIP2Q9P278 1114 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF69Q9UC07 566 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 IPPQ9Y573 584 aa4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 TIMM13Q9Y5L4 95 aaPredicted RBP4.83□□□□□ -1.64
SFSWAP-211ENST00000542813 FGF10O15520 208 aaPredicted RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 SLC26A4O43511 780 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 LEFTY1O75610 366 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 FARP2O94887 1054 aaPredicted RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 RNASE1P07998 156 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 COL6A1P12109 1028 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 ENPP1P22413 925 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 BCL6P41182 706 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 MTNR1BP49286 362 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 RPL11P62913 178 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 SEMA5AQ13591 1074 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 FSCN1Q16658 493 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 IFI16Q16666 785 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 KIAA0753Q2KHM9 967 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 TOR2AQ5JU69 321 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 ANGEL2Q5VTE6 544 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 ESRP1Q6NXG1 681 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 ARHGAP36Q6ZRI8 547 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 PTRH1Q86Y79 214 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 NOSTRINQ8IVI9 506 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 FAM181AQ8N9Y4 354 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 PPP1R35Q8TAP8 253 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 PIWIL2Q8TC59 973 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 FAM168AQ92567 244 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 PGBD4Q96DM1 585 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 MVB12AQ96EY5 273 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 TRMT2BQ96GJ1 504 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 SGCZQ96LD1 299 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 CCDC138Q96M89 665 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 PTCHD1Q96NR3 888 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 JAM3Q9BX67 310 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 GPR62Q9BZJ7 368 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 TMEM60Q9H2L4 133 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 SMOC1Q9H4F8 434 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 RSAD1Q9HA92 442 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 RC3H2Q9HBD1 1191 aaKnown RBP4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 DGKBQ9Y6T7 804 aa4.82□□□□□ -1.64
SFSWAP-211ENST00000542813 SSU72P8A0A1W2PR75 194 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 DBX1A6NMT0 343 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 H3BML4 177 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 SCDO00767 359 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 NDUFS2O75306 463 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 TUSC2O75896 110 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 SYPP08247 313 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 ZNF865P0CJ78 1059 aaPredicted RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 OSMP13725 252 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 PTX3P26022 381 aaPredicted RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 MAN1A1P33908 653 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 FXR1P51114 621 aaKnown RBP eCLIP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 PCBP3P57721 371 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 KIF23Q02241 960 aaPredicted RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 TNK2Q07912 1038 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 SPIRE1Q08AE8 756 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 IFIT5Q13325 482 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 TRIM14Q14142 442 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 UAP1L1Q3KQV9 507 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 DARS2Q6PI48 645 aaKnown RBP4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 EP400NLQ6ZTU2 488 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 C22orf34Q6ZV56 151 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 USP45Q70EL2 814 aa4.81□□□□□ -1.64
SFSWAP-211ENST00000542813 NLRP10Q86W26 655 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms