RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 KLC3Q6P597 504 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC174Q6PII3 467 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SLCO4C1Q6ZQN7 724 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CEP128Q6ZU80 1094 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CACNA2D4Q7Z3S7 1137 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NANOGNBQ7Z5D8 188 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SAPCD2Q86UD0 394 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 HOMER1Q86YM7 354 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 LURAP1LQ8IV03 231 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ARFGAP2Q8N6H7 521 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ANKRD44Q8N8A2 993 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ARL10Q8N8L6 244 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SCAIQ8N9R8 606 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SLC16A10Q8TF71 515 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ARMC5Q96C12 935 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 IQCDQ96DY2 449 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 C8orf76Q96K31 380 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 RNPC3Q96LT9 517 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CATSPER2Q96P56 530 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NR1H4Q96RI1 486 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 LPIN3Q9BQK8 851 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CARD6Q9BX69 1037 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SMG9Q9H0W8 520 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 MUC3BQ9H195 1237 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CLK4Q9HAZ1 481 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ZNF304Q9HCX3 659 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 COPRSQ9NQ92 184 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 KRT82Q9NSB4 513 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 GINM1Q9NU53 330 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 TMEM39AQ9NV64 488 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ANO10Q9NW15 660 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 RMND1Q9NWS8 449 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SUCLA2Q9P2R7 463 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 GPN3Q9UHW5 284 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NRBP1Q9UHY1 535 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 GGA1Q9UJY5 639 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 GTF3C4Q9UKN8 822 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CFAP45Q9UL16 551 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 TMCC3Q9ULS5 477 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SOX13Q9UN79 622 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 R3HDM2Q9Y2K5 976 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NOSIPQ9Y314 301 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 FADS3Q9Y5Q0 445 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 SCINQ9Y6U3 715 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 COMMD3-BMI1R4GMX3 469 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ZC3H13Q5T200 1668 aaKnown RBP4.75□□□□□ -1.65
SNHG1-219ENST00000542112 PPLO60437 1756 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 NSD2O96028 1365 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 ABCC11Q96J66 1382 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 PIK3C2BO00750 1634 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 CAMSAP1Q5T5Y3 1602 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 TRPM1Q7Z4N2 1603 aa4.75□□□□□ -1.65
SNHG1-219ENST00000542112 PTPRTO14522 1441 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TRPM2O94759 1503 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 EFCAB6Q5THR3 1501 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 HTR3EA5X5Y0 456 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 E9PMD0 336 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 ENC1O14682 589 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 AP5Z1O43299 807 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 RGS9O75916 674 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 URI1O94763 535 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 RAPGEF3O95398 923 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 ATP6V1G2O95670 118 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 B3GALT4O96024 378 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CELA3AP09093 270 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TSPY4P0CV99 314 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TSPY10P0CW01 314 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 HSPA8P11142 646 aaKnown RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 KRT4P19013 534 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CALB2P22676 271 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CDC27P30260 824 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CSTF2P33240 577 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 EIF4A3P38919 411 aaKnown RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TNNI2P48788 182 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CLK1P49759 484 aaKnown RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 SCNN1BP51168 640 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CLCN2P51788 898 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 ZNF131P52739 623 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CABP4P57796 275 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CHMP4BP1P59074 171 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CDK17Q00537 523 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 SRSF11Q05519 484 aaKnown RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 PCDH1Q08174 1060 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 PAK2Q13177 524 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 BIRC3Q13489 604 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 PDCD4Q53EL6 469 aaKnown RBP4.74□□□□□ -1.65
SNHG1-219ENST00000542112 COBLL1Q53SF7 1204 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 ALS2CLQ60I27 953 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 PCNX4Q63HM2 1172 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TBC1D9BQ66K14 1250 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TTBK2Q6IQ55 1244 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 PSAPL1Q6NUJ1 521 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 KANK3Q6NY19 840 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 C6orf89Q6UWU4 347 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 KRT77Q7Z794 578 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 DAAM2Q86T65 1068 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 TTC30AQ86WT1 665 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 ERICH1Q86X53 443 aa4.74□□□□□ -1.65
SNHG1-219ENST00000542112 CCDC146Q8IYE0 955 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms