RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 GABBR1Q9UBS5 961 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ZBTB1Q9Y2K1 713 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 TRIM17Q9Y577 477 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 ADGRG1Q9Y653 693 aa5.6□□□□□ -1.51
SNHG1-218ENST00000541615 CFAP43Q8NDM7 1665 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ITSN2Q9NZM3 1697 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 DISP1Q96F81 1524 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ARHGEF12Q9NZN5 1544 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ABCC12Q96J65 1359 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 MROH7Q68CQ1 1323 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 LOC105371267A0A1B0GV96 52 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 TRIM64A6NGJ6 449 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 TRIM64BA6NI03 449 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 AGPSO00116 658 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 KCNJ13O60928 360 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ALDH1L1O75891 902 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 BAIAP3O94812 1187 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 OXSR1O95747 527 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ZBED1O96006 694 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 RHOXF2BP0C7M4 288 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 IDEP14735 1019 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 VCLP18206 1134 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 GNAZP19086 355 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 VHLP40337 213 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 RFC5P40937 340 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 SLC19A1P41440 591 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 SERPINB4P48594 390 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 RASSF2P50749 326 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 VAV2P52735 878 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 POLR2FP61218 127 aaKnown RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 S100A12P80511 92 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 KRT76Q01546 638 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 OCRLQ01968 901 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 RELAQ04206 551 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 GALNT1Q10472 559 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 PDCLQ13371 301 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 SQLEQ14534 574 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 LIN52Q52LA3 116 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 TTC22Q5TAA0 569 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ZNF658Q5TYW1 1059 aaPredicted RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 SNX30Q5VWJ9 437 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 PPP4R4Q6NUP7 873 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ZCCHC8Q6NZY4 707 aaKnown RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 BLOC1S3Q6QNY0 202 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 B3GNT6Q6ZMB0 384 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 Q6ZNX1 250 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 CYP2U1Q7Z449 544 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 HACE1Q8IYU2 909 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ZBED8Q8IZ13 594 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 SCYL3Q8IZE3 742 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 LSMEM1Q8N8F7 131 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ANKLE1Q8NAG6 615 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 MLKLQ8NB16 471 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 APPL2Q8NEU8 664 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 AENQ8WTP8 325 aaKnown RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 AFG1LQ8WV93 481 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 PGBD4Q96DM1 585 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 TMA16Q96EY4 203 aaKnown RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 COX4I2Q96KJ9 171 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 RHOXF2Q9BQY4 288 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 TRIM55Q9BYV6 548 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 SHCBP1LQ9BZQ2 653 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ZCWPW1Q9H0M4 648 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 DNAJC18Q9H819 358 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 RNPEPL1Q9HAU8 725 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 PIDD1Q9HB75 910 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 GDPD2Q9HCC8 539 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 MOV10Q9HCE1 1003 aaKnown RBP5.59□□□□□ -1.51
SNHG1-218ENST00000541615 VTA1Q9NP79 307 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 KCNMB3Q9NPA1 279 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 PPP1R14DQ9NXH3 145 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 KCTD5Q9NXV2 234 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.59□□□□□ -1.513e-11■□□□□ 8.9
SNHG1-218ENST00000541615 SAMD15Q9P1V8 674 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 KIF17Q9P2E2 1029 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 ZNHIT2Q9UHR6 403 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 NFE2L3Q9Y4A8 694 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 TACC3Q9Y6A5 838 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 BCORL1Q5H9F3 1711 aa5.59□□□□□ -1.51
SNHG1-218ENST00000541615 WDR7Q9Y4E6 1490 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 NUP155O75694 1391 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 TTC21AQ8NDW8 1320 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SH3PXD2BA1X283 911 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SNTNA6NMZ2 147 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 GOLGA8RI6L899 631 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 FBP2O00757 339 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 SLC22A1O15245 554 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 HOXA2O43364 376 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 FOXD2O60548 495 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CNOT3O75175 753 aaKnown RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 GMNNO75496 209 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 DAB1O75553 588 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 UBTFL6P0CB48 400 aaPredicted RBP5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CALM1P0DP23 149 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CALM2P0DP24 149 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 CALM3P0DP25 149 aa5.58□□□□□ -1.52
SNHG1-218ENST00000541615 RBP3P10745 1247 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms