RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 BACH1O14867 736 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 TLR2O60603 784 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 FARP2O94887 1054 aaPredicted RBP9.61□□□□□ -0.87
THBS3-210ENST00000541576 GGPS1O95749 300 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 SUPT20HL2P0C7V6 817 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 RSPH10BP0C881 870 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 RARRES1P49788 294 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 ANKRD40Q6AI12 368 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 METTL7BQ6UX53 244 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 TRMT1LQ7Z2T5 733 aaKnown RBP9.61□□□□□ -0.87
THBS3-210ENST00000541576 IRF2BP1Q8IU81 584 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 CCDC60Q8IWA6 550 aaPredicted RBP9.61□□□□□ -0.87
THBS3-210ENST00000541576 MYOCDQ8IZQ8 938 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 KIAA1524Q8TCG1 905 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 TRIM47Q96LD4 638 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 DUSP9Q99956 384 aaKnown RBP9.61□□□□□ -0.87
THBS3-210ENST00000541576 SEMA6BQ9H3T3 888 aa9.61□□□□□ -0.87
THBS3-210ENST00000541576 DDX41Q9UJV9 622 aaKnown RBP9.61□□□□□ -0.87
THBS3-210ENST00000541576 FAM13AO94988 1023 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ARIH2O95376 493 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 GAP43P17677 238 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 LY6KQ17RY6 165 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 FILIP1Q7Z7B0 1213 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ZNF467Q7Z7K2 595 aaPredicted RBP9.6□□□□□ -0.87
THBS3-210ENST00000541576 SFR1Q86XK3 245 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 EEF2KMTQ96G04 330 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 MLXIPQ9HAP2 919 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ANKEF1Q9NU02 776 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 WDR81Q562E7 1941 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 SYNGAP1Q96PV0 1343 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 SLC15A5A6NIM6 579 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 GOLGA6L6A8MZA4 724 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 CBFA2T2O43439 604 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ATG7O95352 703 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 GUCY2CP25092 1073 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 TTLL4Q14679 1199 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ARID5BQ14865 1188 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 C17orf99Q6UX52 265 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 PARVGQ9HBI0 331 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ODF2LQ9ULJ1 636 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 DIS3Q9Y2L1 958 aaKnown RBP9.6□□□□□ -0.87
THBS3-210ENST00000541576 MYH9P35579 1960 aaKnown RBP9.6□□□□□ -0.87
THBS3-210ENST00000541576 TMEM150BA6NC51 233 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 SFI1A8K8P3 1242 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 POLR3GO15318 223 aaPredicted RBP9.6□□□□□ -0.87
THBS3-210ENST00000541576 ZNF862O60290 1169 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ECM2O94769 699 aaPredicted RBP9.6□□□□□ -0.87
THBS3-210ENST00000541576 TM4SF4P48230 202 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 IRX5P78411 483 aaPredicted RBP9.6□□□□□ -0.87
THBS3-210ENST00000541576 XKR9Q5GH70 373 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 CENPPQ6IPU0 288 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 CYP4F22Q6NT55 531 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ANO5Q75V66 913 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 OTUD6AQ7L8S5 288 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 SCFD2Q8WU76 684 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ZIC5Q96T25 663 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 ZNF302Q9NR11 478 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
THBS3-210ENST00000541576 DOCK3Q8IZD9 2030 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 USO1O60763 962 aaKnown RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 GTF2F1P35269 517 aaKnown RBP eCLIP9.59□□□□□ -0.87
THBS3-210ENST00000541576 PRKCEQ02156 737 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 CRHR2Q13324 411 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 PLA2G4FQ68DD2 849 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 CCDC62Q6P9F0 684 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 MYCT1Q8N699 235 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 CSGALNACT2Q8N6G5 542 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 MAML3Q96JK9 1138 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 SH2D3AQ9BRG2 576 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 SRRTQ9BXP5 876 aaKnown RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 MRPL44Q9H9J2 332 aaKnown RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 VTA1Q9NP79 307 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 OLFML3Q9NRN5 406 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 IGSF9BQ9UPX0 1349 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 TPM3P06753 285 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 TXNP10599 105 aaKnown RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 CASP5P51878 434 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 ZNF131P52739 623 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 NPEPPSP55786 919 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 SPAG1Q07617 926 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 CELF3Q5SZQ8 465 aaKnown RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 MAMDC4Q6UXC1 1216 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 NOC3LQ8WTT2 800 aaKnown RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 SCFD1Q8WVM8 642 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 SEPT1Q8WYJ6 367 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 PDGFCQ9NRA1 345 aa9.59□□□□□ -0.87
THBS3-210ENST00000541576 MAFBQ9Y5Q3 323 aaPredicted RBP9.59□□□□□ -0.87
THBS3-210ENST00000541576 GSTTP1A0A1W2PQM5 241 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 HIP1RO75146 1068 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 LRRC63Q05C16 580 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 NR1I3Q14994 352 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 XKR3Q5GH77 459 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TMC6Q7Z403 805 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 DHX37Q8IY37 1157 aaKnown RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 ANKRD20A12PQ8NF67 263 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 CEP170P1Q96L14 293 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 CTAGE1Q96RT6 745 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TSG101Q99816 390 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TINF2Q9BSI4 451 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms