RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 DBF4BQ8NFT6 615 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 SEPT8Q92599 483 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 APBB2Q92870 758 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 TIFAQ96CG3 184 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 NIFKQ9BYG3 293 aaKnown RBP14.74□□□□□ -0.05
LTBR-208ENST00000541005 OSBPL7Q9BZF2 842 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 FAM49AQ9H0Q0 323 aaPredicted RBP14.74□□□□□ -0.05
LTBR-208ENST00000541005 TTYH1Q9H313 450 aaPredicted RBP14.74□□□□□ -0.05
LTBR-208ENST00000541005 NRBP2Q9NSY0 501 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
LTBR-208ENST00000541005 PCDHA11Q9Y5I1 949 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 TRPV2Q9Y5S1 764 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 CDY2AQ9Y6F7 541 aa14.74□□□□□ -0.05
LTBR-208ENST00000541005 GJB2P29033 226 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 PBX2P40425 430 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 QARSP47897 775 aaKnown RBP14.73□□□□□ -0.05
LTBR-208ENST00000541005 KCNJ6P48051 423 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 LPIN1Q14693 890 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 EPHA7Q15375 998 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 FBXO47Q5MNV8 452 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 TSHZ1Q6ZSZ6 1077 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 FAM43BQ6ZT52 329 aaPredicted RBP14.73□□□□□ -0.05
LTBR-208ENST00000541005 Q7L0L9 218 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 HERC6Q8IVU3 1022 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 KIAA0319LQ8IZA0 1049 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 CEP89Q96ST8 783 aa14.73□□□□□ -0.05
LTBR-208ENST00000541005 IFIH1Q9BYX4 1025 aaKnown RBP14.73□□□□□ -0.05
LTBR-208ENST00000541005 COL4A4P53420 1690 aaPredicted RBP14.73□□□□□ -0.05
LTBR-208ENST00000541005 CHD9Q3L8U1 2897 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 KIAA1671Q9BY89 1806 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 M0QZ92 97 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 DKC1O60832 514 aaKnown RBP eCLIP14.72□□□□□ -0.05
LTBR-208ENST00000541005 P4HBP07237 508 aaKnown RBP14.72□□□□□ -0.05
LTBR-208ENST00000541005 ZNF710Q8N1W2 664 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 BANK1Q8NDB2 785 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 CELF4Q9BZC1 486 aaKnown RBP14.72□□□□□ -0.05
LTBR-208ENST00000541005 TMEM60Q9H2L4 133 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 SEMA6BQ9H3T3 888 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 TTC12Q9H892 705 aaPredicted RBP14.72□□□□□ -0.05
LTBR-208ENST00000541005 SEPT9Q9UHD8 586 aaPredicted RBP14.72□□□□□ -0.05
LTBR-208ENST00000541005 MSRAQ9UJ68 235 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 PCDHA12Q9UN75 941 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 SMC3Q9UQE7 1217 aa14.72□□□□□ -0.05
LTBR-208ENST00000541005 YBX2Q9Y2T7 364 aaKnown RBP14.72□□□□□ -0.05
LTBR-208ENST00000541005 FNDC1Q4ZHG4 1894 aaPredicted RBP14.72□□□□□ -0.05
LTBR-208ENST00000541005 CDH23Q9H251 3354 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 MARCH6O60337 910 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 GHRP10912 638 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 MCM7P33993 719 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 DEFB103AP81534 67 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 GNL2Q13823 731 aaKnown RBP14.71□□□□□ -0.05
LTBR-208ENST00000541005 TTC38Q5R3I4 469 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 ANO5Q75V66 913 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 C4orf19Q8IY42 314 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 NEK9Q8TD19 979 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 GUCD1Q96NT3 240 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 LXNQ9BS40 222 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 WRAP73Q9P2S5 460 aaPredicted RBP14.71□□□□□ -0.05
LTBR-208ENST00000541005 NOL7Q9UMY1 257 aaKnown RBP14.71□□□□□ -0.05
LTBR-208ENST00000541005 PPME1Q9Y570 386 aa14.71□□□□□ -0.05
LTBR-208ENST00000541005 IGKV6-21A0A0C4DH24 114 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 LYPLA2O95372 231 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 GJB5O95377 273 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 OR52Z1P0C646 297 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 TOB1P50616 345 aaPredicted RBP14.7□□□□□ -0.06
LTBR-208ENST00000541005 RABGGTBP53611 331 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 TBC1D8BQ0IIM8 1120 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 TMEM62Q0P6H9 643 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 NCAPH2Q6IBW4 605 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 MAP7D2Q96T17 732 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 HSD17B14Q9BPX1 270 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 ZNF576Q9H609 170 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 ZSWIM4Q9H7M6 989 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 AGO3Q9H9G7 860 aaKnown RBP14.7□□□□□ -0.06
LTBR-208ENST00000541005 CHD7Q9P2D1 2997 aa14.7□□□□□ -0.06
LTBR-208ENST00000541005 MYH11P35749 1972 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.69□□□□□ -0.06
LTBR-208ENST00000541005 TMEM150BA6NC51 233 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 GPR32O75388 356 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 AMHP03971 560 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 ATP2B1P20020 1258 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 TMOD1P28289 359 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 TXKP42681 527 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 CLCN3P51790 818 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 ZNF174Q15697 407 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 EFCAB12Q6NXP0 572 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.69□□□□□ -0.06
LTBR-208ENST00000541005 TRMT1LQ7Z2T5 733 aaKnown RBP14.69□□□□□ -0.06
LTBR-208ENST00000541005 METTL13Q8N6R0 699 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 C4orf32Q8N8J7 132 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 SNX21Q969T3 373 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 INTS4Q96HW7 963 aaKnown RBP14.69□□□□□ -0.06
LTBR-208ENST00000541005 EIF2AK1Q9BQI3 630 aaKnown RBP14.69□□□□□ -0.06
LTBR-208ENST00000541005 NKX2-4Q9H2Z4 354 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 CYP26B1Q9NR63 512 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 RGL1Q9NZL6 768 aa14.69□□□□□ -0.06
LTBR-208ENST00000541005 PRRC2BQ5JSZ5 2229 aaKnown RBP14.69□□□□□ -0.06
LTBR-208ENST00000541005 POTEMA6NI47 508 aa14.68□□□□□ -0.06
LTBR-208ENST00000541005 DDX11L8A8MPP1 907 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms