RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 CYP11B2P19099 503 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 GUCY2CP25092 1073 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
VPS33A-204ENST00000540669 BEX3Q00994 111 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 SP4Q02446 784 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 MLLT1Q03111 559 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-204ENST00000540669 ARSHQ5FYA8 562 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 NT5DC1Q5TFE4 455 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 FAM160B1Q5W0V3 765 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 DAW1Q8N136 415 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 PDILTQ8N807 584 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 BBXQ8WY36 941 aaPredicted RBP11.78□□□□□ -0.52
VPS33A-204ENST00000540669 DNAJC19Q96DA6 116 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 TRIM9Q9C026 710 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 DHX33Q9H6R0 707 aaKnown RBP11.78□□□□□ -0.52
VPS33A-204ENST00000540669 XPNPEP1Q9NQW7 623 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 ERAP1Q9NZ08 941 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 KCND2Q9NZV8 630 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 TMEM63CQ9P1W3 806 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 SERTAD1Q9UHV2 236 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 GRIN2DO15399 1336 aa11.78□□□□□ -0.52
VPS33A-204ENST00000540669 KAT6AQ92794 2004 aa11.77□□□□□ -0.52
VPS33A-204ENST00000540669 MBLAC1A4D2B0 266 aaPredicted RBP11.77□□□□□ -0.53
VPS33A-204ENST00000540669 TMEM150BA6NC51 233 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 GOLGA6L4A6NEF3 574 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 H3BRB1 525 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 DNM1LO00429 736 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 C6orf222P0C671 652 aaPredicted RBP11.77□□□□□ -0.53
VPS33A-204ENST00000540669 PLA2G4BP0C869 781 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 COL6A1P12109 1028 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 STAT6P42226 847 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 ZNF131P52739 623 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 DPYDQ12882 1025 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 RRAGBQ5VZM2 374 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 C1orf186Q6ZWK4 172 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 UBE2Q1Q7Z7E8 422 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 DHX58Q96C10 678 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 CTAGE1Q96RT6 745 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 RUSC1Q9BVN2 902 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 AP5M1Q9H0R1 490 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 TUT1Q9H6E5 874 aaKnown RBP11.77□□□□□ -0.53
VPS33A-204ENST00000540669 TUBE1Q9UJT0 475 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
VPS33A-204ENST00000540669 EVPLQ92817 2033 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 MYMKA6NI61 221 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 BACH1O14867 736 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 KLRC4O43908 158 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 HBP1O60381 514 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
VPS33A-204ENST00000540669 C22orf31O95567 290 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 CNGA1P29973 690 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 GJA8P48165 433 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 SARSP49591 514 aaKnown RBP11.76□□□□□ -0.53
VPS33A-204ENST00000540669 HIC1Q14526 733 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 MCM6Q14566 821 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 SNX17Q15036 470 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 MARCH8Q5T0T0 291 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 PLA2G4FQ68DD2 849 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 RINT1Q6NUQ1 792 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 PIGOQ8TEQ8 1089 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 PAGE5Q96GU1 130 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 FIZ1Q96SL8 496 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 C7orf25Q9BPX7 421 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
VPS33A-204ENST00000540669 BHMT2Q9H2M3 363 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 AZI2Q9H6S1 392 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 CYP26B1Q9NR63 512 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 ZNF215Q9UL58 517 aaPredicted RBP11.76□□□□□ -0.53
VPS33A-204ENST00000540669 DNM3Q9UQ16 869 aa11.76□□□□□ -0.53
VPS33A-204ENST00000540669 GTPBP6O43824 516 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 MAFO75444 373 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 CABYRO75952 493 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 TFRCP02786 760 aaKnown RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 ASGR1P07306 291 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 PSEN2P49810 448 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 ACLYP53396 1101 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 NPEPPSP55786 919 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 RTP1P59025 263 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 MFSD10Q14728 455 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 POSTNQ15063 836 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 KCNA10Q16322 511 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 SKOR2Q2VWA4 1001 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 BRDTQ58F21 947 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 GNASQ5JWF2 1037 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 KANK3Q6NY19 840 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 RNF180Q86T96 592 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 PCSK9Q8NBP7 692 aaKnown RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 U2AF1L4Q8WU68 220 aaKnown RBP11.75□□□□□ -0.53
VPS33A-204ENST00000540669 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 CDK5RAP3Q96JB5 506 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 DEFB118Q96PH6 123 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 TIPINQ9BVW5 301 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 KATNAL1Q9BW62 490 aa11.75□□□□□ -0.53
VPS33A-204ENST00000540669 SPC25Q9HBM1 224 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms