RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 CREB3L3Q68CJ9 461 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 WWC2Q6AWC2 1192 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 MIS18BP1Q6P0N0 1132 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 SGMS1Q86VZ5 419 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 CKAP2LQ8IYA6 745 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 ATP8B4Q8TF62 1192 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 PHF7Q9BWX1 381 aaPredicted RBP14.21□□□□□ -0.13
COPS7A-211ENST00000540408 LRRC2Q9BYS8 371 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 ANO3Q9BYT9 981 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 LSG1Q9H089 658 aaKnown RBP14.21□□□□□ -0.13
COPS7A-211ENST00000540408 TMX1Q9H3N1 280 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 ZNF302Q9NR11 478 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 TLR9Q9NR96 1032 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 RGS18Q9NS28 235 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 TCEAL9Q9UHQ7 104 aa14.21□□□□□ -0.13
COPS7A-211ENST00000540408 PUF60Q9UHX1 559 aaKnown RBP14.21□□□□□ -0.13
COPS7A-211ENST00000540408 BARX2Q9UMQ3 279 aaPredicted RBP14.21□□□□□ -0.13
COPS7A-211ENST00000540408 COL1A2P08123 1366 aa14.21□□□□□ -0.14
COPS7A-211ENST00000540408 IGKV6D-21A0A0A0MT36 114 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 TMEM221A6NGB7 291 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 LOC730098B7Z3J9 87 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 M0R296 226 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 DDX39AO00148 427 aaKnown RBP14.2□□□□□ -0.14
COPS7A-211ENST00000540408 MEIS1O00470 390 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 FGF18O76093 207 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 GATMP50440 423 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 ITGB3BPQ13352 177 aaPredicted RBP14.2□□□□□ -0.14
COPS7A-211ENST00000540408 NECTIN1Q15223 517 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 PDXDC2PQ6P474 469 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 ABHD15Q6UXT9 468 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 NIPA1Q7RTP0 329 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 PGBD1Q96JS3 809 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 NEK1Q96PY6 1258 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 ERVK-5Q9HDB9 667 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 ANO2Q9NQ90 1003 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 TMEM260Q9NX78 707 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 ST3GAL5Q9UNP4 418 aa14.2□□□□□ -0.14
COPS7A-211ENST00000540408 NOC2LQ9Y3T9 749 aaKnown RBP14.2□□□□□ -0.14
COPS7A-211ENST00000540408 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
COPS7A-211ENST00000540408 V9GY48 417 aaPredicted RBP14.2□□□□□ -0.14
COPS7A-211ENST00000540408 PER2O15055 1255 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 ZBTB43O43298 467 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 ATF7P17544 494 aaPredicted RBP14.19□□□□□ -0.14
COPS7A-211ENST00000540408 SREBF1P36956 1147 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 CRYBB1P53674 252 aaPredicted RBP14.19□□□□□ -0.14
COPS7A-211ENST00000540408 PTPN5P54829 565 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 ZXDAP98168 799 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 CBX2Q14781 532 aaPredicted RBP14.19□□□□□ -0.14
COPS7A-211ENST00000540408 RTN1Q16799 776 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 FAM102BQ5T8I3 360 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 SWSAP1Q6NVH7 229 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 APOA5Q6Q788 366 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 PLA2G4DQ86XP0 818 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 KIAA0319LQ8IZA0 1049 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 METTL13Q8N6R0 699 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 RPGRIP1Q96KN7 1286 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 TMEM161AQ9NX61 479 aa14.19□□□□□ -0.14
COPS7A-211ENST00000540408 CNTNAP5Q8WYK1 1306 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 IPO5O00410 1097 aaKnown RBP14.18□□□□□ -0.14
COPS7A-211ENST00000540408 HOXA2O43364 376 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 GLP2RO95838 553 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 LAG3P18627 525 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 DUSP6Q16828 381 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 KIZQ2M2Z5 673 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 MCTP2Q6DN12 878 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 BBXQ8WY36 941 aaPredicted RBP14.18□□□□□ -0.14
COPS7A-211ENST00000540408 ELAC1Q9H777 363 aaKnown RBP14.18□□□□□ -0.14
COPS7A-211ENST00000540408 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 TYW1Q9NV66 732 aaKnown RBP14.18□□□□□ -0.14
COPS7A-211ENST00000540408 BARHL2Q9NY43 387 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 CEP131Q9UPN4 1083 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 LZTS1Q9Y250 596 aa14.18□□□□□ -0.14
COPS7A-211ENST00000540408 ATG2AQ2TAZ0 1938 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 C9IYK1 514 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 MGEA5O60502 916 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 CCNE2O96020 404 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 ZSCAN20P17040 1043 aaPredicted RBP14.17□□□□□ -0.14
COPS7A-211ENST00000540408 TMOD1P28289 359 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 KRT17Q04695 432 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 TYW1BQ6NUM6 668 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 CCDC60Q8IWA6 550 aaPredicted RBP14.17□□□□□ -0.14
COPS7A-211ENST00000540408 ABI1Q8IZP0 508 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 ZNF710Q8N1W2 664 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 FBXL6Q8N531 539 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 OSMRQ99650 979 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 ZNF577Q9BSK1 485 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 NGRNQ9NPE2 291 aaKnown RBP14.17□□□□□ -0.14
COPS7A-211ENST00000540408 ENTPD7Q9NQZ7 604 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 PCDHGC5Q9Y5F6 944 aa14.17□□□□□ -0.14
COPS7A-211ENST00000540408 PIEZO1Q92508 2521 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 CCDC196A0A1B0GTZ2 297 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 GOLGA8AA7E2F4 631 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 GOLGA8BA8MQT2 603 aa14.16□□□□□ -0.14
COPS7A-211ENST00000540408 MAGEB2O15479 319 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms