RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 ASGR1P07306 291 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 CCNE1P24864 410 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 EEF1GP26641 437 aaKnown RBP13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 ZNF76P36508 570 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 GJA9P57773 515 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 SNX17Q15036 470 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 PRR16Q569H4 304 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 C1orf53Q5VUE5 145 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 IQSEC1Q6DN90 963 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 FOXR2Q6PJQ5 311 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 FCHSD1Q86WN1 690 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 FAM114A1Q8IWE2 563 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 LRRC15Q8TF66 581 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 MPHOSPH6Q99547 160 aaKnown RBP13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 INTS13Q9NVM9 706 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 ITIH6Q6UXX5 1313 aa13.26□□□□□ -0.29
CYB561A3-215ENST00000540317 B4DLN1 442 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 KIF2AO00139 706 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 PQBP1O60828 265 aaKnown RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 FGFR1OPO95684 399 aaKnown RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 TPM2P07951 284 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 TPM1P09493 284 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 SMPD1P17405 629 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 BEX3Q00994 111 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 TRIM14Q14142 442 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 MCM6Q14566 821 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 ARID5BQ14865 1188 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 TCP11X2Q5H9J9 407 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 CCSAPQ6IQ19 270 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 TAPT1Q6NXT6 567 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 APTXQ7Z2E3 356 aaKnown RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 MCF2L2Q86YR7 1114 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 P2RX5Q93086 422 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 TMX1Q9H3N1 280 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 VTA1Q9NP79 307 aa13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 MAGEC2Q9UBF1 373 aaPredicted RBP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.25□□□□□ -0.29
CYB561A3-215ENST00000540317 MYMKA6NI61 221 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 CFBP00751 764 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 CST5P28325 142 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 KCNJ12Q14500 433 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 HSP90AA4PQ58FG1 418 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TLK2Q86UE8 772 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TDHQ8IZJ6 230 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 C17orf53Q8N3J3 647 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 DNERQ8NFT8 737 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TBC1D5Q92609 795 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 LENG9Q96B70 501 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 WDR11Q9BZH6 1224 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 UPF3AQ9H1J1 476 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 GNEQ9Y223 722 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 R3HCC1Q9Y3T6 440 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 MCM3APO60318 1980 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 N4BP3O15049 544 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 STX10O60499 249 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 KIF20AO95235 890 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 CLTBP09497 229 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 MUTP22033 750 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 RPA1P27694 616 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 HOXA13P31271 388 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 PBX1P40424 430 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 SETQ01105 290 aaPredicted RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 KRT31Q15323 416 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 FSCN1Q16658 493 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TMEM63BQ5T3F8 832 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TTI2Q6NXR4 508 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 CCAR2Q8N163 923 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 GUF1Q8N442 669 aaKnown RBP13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 DDX12PQ92771 950 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 PDLIM7Q9NR12 457 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TMEM39AQ9NV64 488 aa13.24□□□□□ -0.29
CYB561A3-215ENST00000540317 TRIM43BA6NCK2 446 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 AKR1B15C9JRZ8 316 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 FAM86B1E9PN63 330 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 ARHGAP6O43182 974 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 ZEB2O60315 1214 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 FAM86B2P0C5J1 330 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 HSD17B4P51659 736 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 COPB1P53618 953 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 GHRHRQ02643 423 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 SPIRE1Q08AE8 756 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 CXCL17Q6UXB2 119 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 CCDC65Q8IXS2 484 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 BADQ92934 168 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 TRIM43Q96BQ3 446 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 CCDC51Q96ER9 411 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 PANX2Q96RD6 677 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 POLR3CQ9BUI4 534 aaPredicted RBP13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 NAA15Q9BXJ9 866 aaKnown RBP13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 KIAA1024Q9UPX6 916 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
CYB561A3-215ENST00000540317 SOX1O00570 391 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms