RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 SYDE2Q5VT97 1194 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
CPNE8-203ENST00000538596 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
CPNE8-203ENST00000538596 RNF14Q9UBS8 474 aa13.09□□□□□ -0.31
CPNE8-203ENST00000538596 PDXKO00764 312 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TGFB1I1O43294 461 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 CALUO43852 315 aaPredicted RBP13.08□□□□□ -0.32
CPNE8-203ENST00000538596 OPA1O60313 960 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 KIF4AO95239 1232 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 APBA3O96018 575 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 PDCLQ13371 301 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 ALS2CLQ60I27 953 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 MOXD1Q6UVY6 613 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TPH2Q8IWU9 490 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 PLCB1Q9NQ66 1216 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 GFPT2O94808 682 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 NPR1P16066 1061 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 NNTQ13423 1086 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 CFAP58Q5T655 872 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 RINT1Q6NUQ1 792 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TATDN1Q6P1N9 297 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
CPNE8-203ENST00000538596 IQCKQ8N0W5 287 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 BCAS4Q8TDM0 211 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TAF4BQ92750 862 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TDRD3Q9H7E2 651 aaKnown RBP13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TYW1Q9NV66 732 aaKnown RBP13.08□□□□□ -0.32
CPNE8-203ENST00000538596 NRXN2Q9P2S2 1712 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 SCN9AQ15858 1988 aa13.08□□□□□ -0.32
CPNE8-203ENST00000538596 TMCO5BA8MYB1 307 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 TBCAO75347 108 aaKnown RBP13.07□□□□□ -0.32
CPNE8-203ENST00000538596 ECE1P42892 770 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 PAK2Q13177 524 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 VGLL3A8MV65 326 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 DDX3XO00571 662 aaKnown RBP eCLIP13.07□□□□□ -0.32
CPNE8-203ENST00000538596 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 MSL1Q68DK7 614 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 GBP6Q6ZN66 633 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 MYCT1Q8N699 235 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 U2AF1L4Q8WU68 220 aaKnown RBP13.07□□□□□ -0.32
CPNE8-203ENST00000538596 DDX47Q9H0S4 455 aaKnown RBP13.07□□□□□ -0.32
CPNE8-203ENST00000538596 TMEM59LQ9UK28 342 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
CPNE8-203ENST00000538596 TBX3O15119 743 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 CFBP00751 764 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 EPB41P11171 864 aaKnown RBP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 BMP3P12645 472 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 ITGA4P13612 1032 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 JAM2P57087 298 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 METTL13Q8N6R0 699 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 TPCN2Q8NHX9 752 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 DYDC2Q96IM9 177 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 FAM20AQ96MK3 541 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 ZMYM2Q9UBW7 1377 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 UTRNP46939 3433 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 HLTFQ14527 1009 aaKnown RBP eCLIP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 SLC27A3Q5K4L6 730 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 DACT2Q5SW24 774 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 OR2W6PQ8NHA6 318 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 OSGEPQ9NPF4 335 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 PRR12Q9ULL5 1215 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 ZEB2O60315 1214 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 SLITRK3O94933 977 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 EYA4O95677 639 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 ECHS1P30084 290 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 CORO7P57737 925 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 LNX1Q8TBB1 728 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 IDI2Q9BXS1 227 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 TSPYL1Q9H0U9 437 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 NEUROG2Q9H2A3 272 aa13.06□□□□□ -0.32
CPNE8-203ENST00000538596 WRAP73Q9P2S5 460 aaPredicted RBP13.06□□□□□ -0.32
CPNE8-203ENST00000538596 ECE2O60344 883 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 FLOT1O75955 427 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 TRIM49P0CI25 452 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 TRIM49CP0CI26 452 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 ZBTB48P10074 688 aaPredicted RBP13.05□□□□□ -0.32
CPNE8-203ENST00000538596 CIITAP33076 1130 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 TNNC1P63316 161 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 GUCY1A3Q02108 690 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 BMT2Q1RMZ1 405 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 ZNF772Q68DY9 489 aaPredicted RBP13.05□□□□□ -0.32
CPNE8-203ENST00000538596 CCDC174Q6PII3 467 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 GLYCTKQ8IVS8 523 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 BORCS6Q96GS4 357 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 GMCL1Q96IK5 515 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 RNPC3Q96LT9 517 aaKnown RBP13.05□□□□□ -0.32
CPNE8-203ENST00000538596 HSD17B14Q9BPX1 270 aa13.05□□□□□ -0.32
CPNE8-203ENST00000538596 NOC2LQ9Y3T9 749 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms