RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 FEZ2Q9UHY8 353 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 HYOU1Q9Y4L1 999 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 NRXN1Q9ULB1 1477 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 S100BP04271 92 aaPredicted RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 RARBP10826 455 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 CYP27A1Q02318 531 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 EHHADHQ08426 723 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 PPFIA1Q13136 1202 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 HHIPL2Q6UWX4 724 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ANKRD13AQ8IZ07 590 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 TIGD1Q96MW7 591 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 EIF2AK1Q9BQI3 630 aaKnown RBP5.8□□□□□ -1.48
LRP6-203ENST00000538239 RWDD2AQ9UIY3 292 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 AK9Q5TCS8 1911 aa5.8□□□□□ -1.48
LRP6-203ENST00000538239 ENTPD3O75355 529 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 CASP1P29466 404 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 PSMC5P62195 406 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 MUM1L1Q5H9M0 696 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 NXNQ6DKJ4 435 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 NEDD1Q8NHV4 660 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 FAM81BQ96LP2 452 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 C2orf40Q9H1Z8 148 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ADARB2Q9NS39 739 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 SSTR3P32745 418 aaPredicted RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 TGFB2P61812 414 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 TRIM28Q13263 835 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 MAPK8IP2Q13387 824 aaPredicted RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 DARS2Q6PI48 645 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 C11orf57Q6ZUT1 292 aaPredicted RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 CCDC13Q8IYE1 715 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 DCLK2Q8N568 766 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ARFGAP2Q8N6H7 521 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 PPP2R2CQ9Y2T4 447 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 BZW2Q9Y6E2 419 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 NDUFB10O96000 172 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 RAPH1Q70E73 1250 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 SAAL1Q96ER3 474 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 NUDT12Q9BQG2 462 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 MRPL4Q9BYD3 311 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 SAMSN1Q9NSI8 373 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.79□□□□□ -1.48
LRP6-203ENST00000538239 MTMR4Q9NYA4 1195 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 POLLQ9UGP5 575 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ORC4O43929 436 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 GGPS1O95749 300 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 GSTA1P08263 222 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 GSTA2P09210 222 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 FDX1P10109 184 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ADORA2BP29275 332 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 GTF2A2P52657 109 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ZNF131P52739 623 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ARL6IP4Q66PJ3 421 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 ERICH1Q86X53 443 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 KIF12Q96FN5 646 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 FAM20AQ96MK3 541 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 TEX13BQ9BXU2 312 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 IFT122Q9HBG6 1241 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 PNPLA7Q6ZV29 1317 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 CIB2O75838 187 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 GH1P01241 217 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 EEF1GP26641 437 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 STAT5BP51692 787 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 YWHAGP61981 247 aaKnown RBP eCLIP5.79□□□□□ -1.48
LRP6-203ENST00000538239 KRT33BQ14525 404 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 ARL13BQ3SXY8 428 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 LPAR1Q92633 364 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 SUCLA2Q9P2R7 463 aaPredicted RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 NPHP3-ACAD11A0A0J9YXS1 232 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 GOLGA8CPA6NN73 597 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 RRP9O43818 475 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 U2AF2P26368 475 aaKnown RBP eCLIP5.79□□□□□ -1.482e-6■■■□□ 16.5
LRP6-203ENST00000538239 GBP1P32455 592 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 COASYQ13057 564 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 KCNV1Q6PIU1 500 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 YAF2Q8IY57 180 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 DNAAF3Q8N9W5 541 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 PRPF31Q8WWY3 499 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 KATNAL1Q9BW62 490 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 PLCB1Q9NQ66 1216 aa5.79□□□□□ -1.48
LRP6-203ENST00000538239 FAM217BQ9NTX9 383 aaPredicted RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 DDX41Q9UJV9 622 aaKnown RBP5.79□□□□□ -1.48
LRP6-203ENST00000538239 DDNO94850 711 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 MYL1P05976 194 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 YWHABP31946 246 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 GCLMP48507 274 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 NT5C2P49902 561 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 GKAP1Q5VSY0 366 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 ARHGEF18Q6ZSZ5 1173 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 SRBD1Q8N5C6 995 aaKnown RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 RNF149Q8NC42 400 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 AGBL3Q8NEM8 1001 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 P3H4Q92791 437 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 SH2D3AQ9BRG2 576 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 THAP9Q9H5L6 903 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 TRPC7Q9HCX4 862 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 EPN1Q9Y6I3 576 aaPredicted RBP5.78□□□□□ -1.48
LRP6-203ENST00000538239 SPDYE2BA6NHP3 402 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 PP2D1A8MPX8 630 aa5.78□□□□□ -1.48
LRP6-203ENST00000538239 MCF2LO15068 1137 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms