RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 SNED1Q8TER0 1413 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 A8MUI8 341 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 E7ENQ6 273 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 G3V3G9 751 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 AKR1B10O60218 316 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 MMEP08473 750 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 LIFRP42702 1097 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 PMS1P54277 932 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 ADAM9Q13443 819 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 DCAF8Q5TAQ9 597 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 TRIM68Q6AZZ1 485 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 TTLL6Q8N841 843 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 IFT74Q96LB3 600 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 INPP4AQ96PE3 977 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 ERGIC2Q96RQ1 377 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 PPP1R1BQ9UD71 204 aaPredicted RBP12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 NID2Q14112 1375 aa12.36□□□□□ -0.43
SEMA4D-221ENST00000537934 DLEC1Q9Y238 1755 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 FAM205AQ6ZU69 1335 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 A0A1B0GVG6 124 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 ZSCAN9O15535 394 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 CHN1P15882 459 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 GNAZP19086 355 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 COPS2P61201 443 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 BNIP1Q12981 228 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 AOC3Q16853 763 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 TMEM67Q5HYA8 995 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 USP38Q8NB14 1042 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 TRIM47Q96LD4 638 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 EYA3Q99504 573 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 CCDC134Q9H6E4 229 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 EIF4E1BA6NMX2 242 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 MAP3K13O43283 966 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 HIP1RO75146 1068 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 ATP6V1C1P21283 382 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 TUBP50607 506 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 EIF3BP55884 814 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 USP4Q13107 963 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 ANKRD23Q86SG2 305 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 ANKRD13CQ8N6S4 541 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 SH3RF3Q8TEJ3 882 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 PBKQ96KB5 322 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 PLEKHG4BQ96PX9 1271 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 KRT23Q9C075 422 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 NSRP1Q9H0G5 558 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 DCP1AQ9NPI6 582 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 G3BP2Q9UN86 482 aaKnown RBP12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
SEMA4D-221ENST00000537934 BUB1O43683 1085 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 AKNAD1Q5T1N1 836 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 ASRGL1Q7L266 308 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 RTFDC1Q9BY42 306 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 CRNKL1Q9BZJ0 848 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 KIAA1551Q9HCM1 1747 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 USP17L12C9JPN9 530 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 USP17L21D6R901 530 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 GBP1P32455 592 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 PCK1P35558 622 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 MMP13P45452 471 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 RASSF7Q02833 373 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 ZCWPW1Q9H0M4 648 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 NEUROG2Q9H2A3 272 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 PCMTD2Q9NV79 361 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 STK38LQ9Y2H1 464 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 PCDHGA4Q9Y5G9 962 aa12.34□□□□□ -0.43
SEMA4D-221ENST00000537934 MYH7BA7E2Y1 1941 aa12.33□□□□□ -0.43
SEMA4D-221ENST00000537934 F8VZ95 297 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 PSMA7O14818 248 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 ECE2O60344 883 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 MYBL1P10243 752 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 CYP2D6P10635 497 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 BTDP43251 543 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 GSTO1P78417 241 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 MEI1Q5TIA1 1274 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 CHADLQ6NUI6 762 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 TTI2Q6NXR4 508 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 MFSD6Q6ZSS7 791 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 TMC3Q7Z5M5 1100 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 CRACR2BQ8N4Y2 399 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 KIF13BQ9NQT8 1826 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 TIAM2Q8IVF5 1701 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 CES2O00748 559 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 SNX3O60493 162 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 PALMO75781 387 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 POLD1P28340 1107 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 FLT3P36888 993 aa12.33□□□□□ -0.44
SEMA4D-221ENST00000537934 GNAQP50148 359 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms