RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 TNNI3KQ59H18 835 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PCGF5Q86SE9 256 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 PATL1Q86TB9 770 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TPH2Q8IWU9 490 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 OR9Q1Q8NGQ5 310 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TAF1DQ9H5J8 278 aaPredicted RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 NOC2LQ9Y3T9 749 aaKnown RBP6.06□□□□□ -1.44
CSMD1-215ENST00000537824 L3MBTL1Q9Y468 752 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 FPGT-TNNI3KV9GXZ4 949 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 NOS1P29475 1434 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TAF4O00268 1085 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 DDHD2O94830 711 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 FAM107AO95990 144 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 MARK3P27448 753 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 TECP42680 631 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 CENPUQ71F23 418 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 MS4A14Q96JA4 679 aa6.06□□□□□ -1.44
CSMD1-215ENST00000537824 NBPF26B4DH59 902 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 SLC20A2Q08357 652 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ADCK5Q3MIX3 580 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 HABP4Q5JVS0 413 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 KLC3Q6P597 504 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GPR141Q7Z602 305 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 STAG2Q8N3U4 1231 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 NBPF15Q8N660 670 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 KLHL23Q8NBE8 558 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ALG13Q9NP73 1137 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ABHD10Q9NUJ1 306 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 USP40Q9NVE5 1235 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 C6orf203Q9P0P8 240 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GOLGA8SH3BPF8 625 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GOLGA8MH3BSY2 632 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 OTUD4Q01804 1114 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 RIN2Q8WYP3 895 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ERP27Q96DN0 273 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 BPIFA3Q9BQP9 254 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 FAM192AQ9GZU8 254 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 PLEKHG2Q9H7P9 1386 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 PNMA6EA0A0J9YXQ4 647 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 IL10P22301 178 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 RNF207Q6ZRF8 634 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 CMTR1Q8N1G2 835 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 MCUQ8NE86 351 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 CCDC87Q9NVE4 849 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 POLR3EQ9NVU0 708 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 KDM3AQ9Y4C1 1321 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 DICER1Q9UPY3 1922 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 F8W031 263 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 SEMA3FQ13275 785 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 KCTD21Q4G0X4 260 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 LRRC8EQ6NSJ5 796 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ZNF483Q8TF39 744 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GIPC2Q8TF65 315 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 CCPG1Q9ULG6 757 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 IQANK1A0A1B0GTG1 560 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 RESTQ13127 1097 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 FOXR1Q6PIV2 292 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 RDH13Q8NBN7 331 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 SUPT20HQ8NEM7 779 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ZCRB1Q8TBF4 217 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 STK24Q9Y6E0 443 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 STRNO43815 780 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 PLCG2P16885 1265 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 PMS2P54278 862 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 P2RX5Q93086 422 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GVINP1Q7Z2Y8 2422 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 MAFGO15525 162 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 TSC22D2O75157 780 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 BLVRAP53004 296 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 VIPAS39Q9H9C1 493 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 COG4Q9H9E3 785 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ABCC1P33527 1531 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ABCC12Q96J65 1359 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ARFGEF3Q5TH69 2177 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 H3BQF6 201 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 KRT19P08727 400 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 PYGBP11216 843 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 VHLP40337 213 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 SFSWAPQ12872 951 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GPS1Q13098 491 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ADAM9Q13443 819 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 NEK8Q86SG6 692 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 TUBGCP3Q96CW5 907 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 CUEDC2Q9H467 287 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ARMT1Q9H993 441 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 PARP3Q9Y6F1 533 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 TRIP12Q14669 1992 aaPredicted RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GOLGA8HP0CJ92 632 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GYS1P13807 737 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 BRAFP15056 766 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 YWHAEP62258 255 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 MKRN3Q13064 507 aaKnown RBP6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ZCWPW2Q504Y3 356 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 SCYL2Q6P3W7 929 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 ZFYVE9O95405 1425 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 GRID2IPA4D2P6 1211 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 KRT7P08729 469 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 STX3Q13277 289 aa6.05□□□□□ -1.44
CSMD1-215ENST00000537824 EXOC8Q8IYI6 725 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms