RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 MRPL42Q9Y6G3 142 aaKnown RBP10.99□□□□□ -0.65
CHD4-207ENST00000537634 MUC3AQ02505 3323 aa10.99□□□□□ -0.65
CHD4-207ENST00000537634 EVPLQ92817 2033 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 GRXCR2A6NFK2 248 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 DHX15O43143 795 aaKnown RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 MMP1P03956 469 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 PSAPP07602 524 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 IL9P15248 144 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 IBSPP21815 317 aaPredicted RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 COL19A1Q14993 1142 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 PKN1Q16512 942 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 TMEM266Q2M3C6 531 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 PAN2Q504Q3 1202 aaKnown RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 PRR16Q569H4 304 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 ODR4Q5SWX8 454 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 RTN4RL1Q86UN2 441 aaPredicted RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 FAM178BQ8IXR5 827 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 SMAP1Q8IYB5 467 aaPredicted RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 GJD3Q8N144 294 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 FBXL16Q8N461 479 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 RASGRP4Q8TDF6 673 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 SLC26A6Q9BXS9 759 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
CHD4-207ENST00000537634 EPHX3Q9H6B9 360 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 SAMM50Q9Y512 469 aa10.98□□□□□ -0.65
CHD4-207ENST00000537634 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 DENND3A2RUS2 1198 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 PPFIA3O75145 1194 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 C22orf31O95567 290 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 IFNAR1P17181 557 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
CHD4-207ENST00000537634 NAALADL2Q58DX5 795 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 TMEM31Q5JXX7 168 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 FAM43BQ6ZT52 329 aaPredicted RBP10.97□□□□□ -0.65
CHD4-207ENST00000537634 TRMT1LQ7Z2T5 733 aaKnown RBP10.97□□□□□ -0.65
CHD4-207ENST00000537634 KIAA0319LQ8IZA0 1049 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 CRIPAKQ8N1N5 446 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 KHSRPQ92945 711 aaKnown RBP eCLIP10.97□□□□□ -0.651e-7■□□□□ 10
CHD4-207ENST00000537634 P2RX5Q93086 422 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 PPP2R3CQ969Q6 453 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 FAM167AQ96KS9 214 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 PPP1R16BQ96T49 567 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 AGXT2Q9BYV1 514 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 TMX1Q9H3N1 280 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 ERVK-5Q9HDB9 667 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 ALG13Q9NP73 1137 aaKnown RBP10.97□□□□□ -0.65
CHD4-207ENST00000537634 CD320Q9NPF0 282 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 C1orf112Q9NSG2 853 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 PLAGL2Q9UPG8 496 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 CEP131Q9UPN4 1083 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 NOC2LQ9Y3T9 749 aaKnown RBP10.97□□□□□ -0.65
CHD4-207ENST00000537634 PCDHB7Q9Y5E2 793 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 PCDHA10Q9Y5I2 948 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 MAFBQ9Y5Q3 323 aaPredicted RBP10.97□□□□□ -0.65
CHD4-207ENST00000537634 WDR81Q562E7 1941 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 XIRP2A4UGR9 3374 aa10.97□□□□□ -0.65
CHD4-207ENST00000537634 WDR64B1ANS9 1081 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 GPR182O15218 404 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 ATP4AP20648 1035 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 CIITAP33076 1130 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 GATMP50440 423 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 CCT2P78371 535 aaKnown RBP10.96□□□□□ -0.65
CHD4-207ENST00000537634 C1QBPQ07021 282 aaKnown RBP10.96□□□□□ -0.65
CHD4-207ENST00000537634 HYAL1Q12794 435 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 NTRK3Q16288 839 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 TRIM22Q8IYM9 498 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 TMEM40Q8WWA1 233 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 MAP7D2Q96T17 732 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 OSMRQ99650 979 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 ADAM2Q99965 735 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 LRFN3Q9BTN0 628 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 NCOA5Q9HCD5 579 aaKnown RBP10.96□□□□□ -0.65
CHD4-207ENST00000537634 GABBR1Q9UBS5 961 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 HCN4Q9Y3Q4 1203 aa10.96□□□□□ -0.65
CHD4-207ENST00000537634 FNDC1Q4ZHG4 1894 aaPredicted RBP10.95□□□□□ -0.66
CHD4-207ENST00000537634 FAM86C2PA6NEL3 165 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 PI4K2BG5E9Z4 385 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 CPLX1O14810 134 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 MAGEB2O15479 319 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 MGEA5O60502 916 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 GAS7O60861 476 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 VTNP04004 478 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 ITGB1P05556 798 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 PDIA3P30101 505 aaKnown RBP10.95□□□□□ -0.66
CHD4-207ENST00000537634 CLCN3P51790 818 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 CRYBB1P53674 252 aaPredicted RBP10.95□□□□□ -0.66
CHD4-207ENST00000537634 NLRP5P59047 1200 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 CLUL1Q15846 466 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 CTC1Q2NKJ3 1217 aa10.95□□□□□ -0.66
CHD4-207ENST00000537634 SPOUT1Q5T280 376 aaKnown RBP10.95□□□□□ -0.66
CHD4-207ENST00000537634 SLC24A5Q71RS6 500 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms