RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 ARHGEF35A5YM69 484 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-206ENST00000536241 MSCO60682 206 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 SLC26A2P50443 739 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 RAD51AP2Q09MP3 1159 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 DPYDQ12882 1025 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 KCNA10Q16322 511 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 MTERF2Q49AM1 385 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 C1orf186Q6ZWK4 172 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 KLHDC9Q8NEP7 349 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 BBXQ8WY36 941 aaPredicted RBP12.83□□□□□ -0.36
CDCA3-206ENST00000536241 KAT2BQ92831 832 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 C7orf25Q9BPX7 421 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 RUSC1Q9BVN2 902 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 LRRC27Q9C0I9 530 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 RNF208Q9H0X6 261 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 CYP26B1Q9NR63 512 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 KIAA1468Q9P260 1216 aa12.83□□□□□ -0.36
CDCA3-206ENST00000536241 ZEB2O60315 1214 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 HBP1O60381 514 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 CCL5P13501 91 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 PURAQ00577 322 aaKnown RBP12.82□□□□□ -0.36
CDCA3-206ENST00000536241 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-206ENST00000536241 GIT2Q14161 759 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 ISM2Q6H9L7 571 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-206ENST00000536241 CXCL17Q6UXB2 119 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 MAEAQ7L5Y9 396 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 ATP8B4Q8TF62 1192 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 PPP1R13LQ8WUF5 828 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 CCDC43Q96MW1 224 aaKnown RBP12.82□□□□□ -0.36
CDCA3-206ENST00000536241 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-206ENST00000536241 ZNF215Q9UL58 517 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-206ENST00000536241 TRPC6Q9Y210 931 aa12.82□□□□□ -0.36
CDCA3-206ENST00000536241 SYCE3A1L190 88 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 KPNA6O60684 536 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 USO1O60763 962 aaKnown RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 LETM1O95202 739 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 KRT18P05783 430 aaKnown RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 ASGR1P07306 291 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 INSRRP14616 1297 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 LRRC41Q15345 812 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 TARBP2Q15633 366 aaKnown RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 RBM43Q6ZSC3 357 aaKnown RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 RNF180Q86T96 592 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 DNAJC19Q96DA6 116 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 FAM167AQ96KS9 214 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 DEFB118Q96PH6 123 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 CEP89Q96ST8 783 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 PAK6Q9NQU5 681 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-206ENST00000536241 PRDM10Q9NQV6 1147 aa12.81□□□□□ -0.36
CDCA3-206ENST00000536241 HAS3O00219 553 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 BIN1O00499 593 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 KLRC4O43908 158 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 SMC2O95347 1197 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 F2P00734 622 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 RPN1P04843 607 aaKnown RBP12.8□□□□□ -0.36
CDCA3-206ENST00000536241 MYL1P05976 194 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 IDEP14735 1019 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 CST5P28325 142 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-206ENST00000536241 PSEN2P49810 448 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 ASIC1P78348 528 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 MFSD10Q14728 455 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 PCSK9Q8NBP7 692 aaKnown RBP12.8□□□□□ -0.36
CDCA3-206ENST00000536241 ARRDC4Q8NCT1 418 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 SPATA20Q8TB22 786 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 TRAPPC12Q8WVT3 735 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 ZNF333Q96JL9 665 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 MTG1Q9BT17 334 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-206ENST00000536241 PDLIM7Q9NR12 457 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 TUBE1Q9UJT0 475 aa12.8□□□□□ -0.36
CDCA3-206ENST00000536241 RSPH10B2B2RC85 870 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 ZBTB42B2RXF5 422 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 DGAT1O75907 488 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 RSPH10BP0C881 870 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 IGBP1P78318 339 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 KMT5BQ4FZB7 885 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 ZNF484Q5JVG2 852 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 NT5DC1Q5TFE4 455 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 CNNM4Q6P4Q7 775 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 ZBTB10Q96DT7 871 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 GSDMAQ96QA5 445 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 REEP2Q9BRK0 252 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 SETD4Q9NVD3 440 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 PANK4Q9NVE7 773 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 KCND2Q9NZV8 630 aa12.79□□□□□ -0.36
CDCA3-206ENST00000536241 PVALEFA0A1B0GWK0 134 aa12.78□□□□□ -0.36
CDCA3-206ENST00000536241 SMIM10L2AP0DMW4 78 aa12.78□□□□□ -0.36
CDCA3-206ENST00000536241 SMIM10L2BP0DMW5 78 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms