RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 SCNN1GP51170 649 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 CD83Q01151 205 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 RIN1Q13671 783 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 HSP90AA2PQ14568 343 aaPredicted RBP4.12□□□□□ -1.75
SKA3-207ENST00000536239 MBNL2Q5VZF2 373 aaKnown RBP4.12□□□□□ -1.75
SKA3-207ENST00000536239 TMEM200BQ69YZ2 307 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 STYK1Q6J9G0 422 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 Q6ZRM9 215 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 ZNF662Q6ZS27 426 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 MRGPREQ86SM8 312 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 ZNF764Q96H86 408 aaPredicted RBP4.12□□□□□ -1.75
SKA3-207ENST00000536239 ACBD3Q9H3P7 528 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 NRDE2Q9H7Z3 1164 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 PTGFRNQ9P2B2 879 aa4.12□□□□□ -1.75
SKA3-207ENST00000536239 AOAHP28039 575 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 MC4RP32245 332 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 CNGB1Q14028 1251 aaPredicted RBP4.11□□□□□ -1.75
SKA3-207ENST00000536239 KANK2Q63ZY3 851 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 ARHGAP36Q6ZRI8 547 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 PRIMA1Q86XR5 153 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 NTN5Q8WTR8 489 aaPredicted RBP4.11□□□□□ -1.75
SKA3-207ENST00000536239 RABGGTAQ92696 567 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 HAS1Q92839 578 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 ALG1Q9BT22 464 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 BTBD7Q9P203 1132 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 PRKAG3Q9UGI9 489 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 FAM184BQ9ULE4 1060 aa4.11□□□□□ -1.75
SKA3-207ENST00000536239 BLACEA4D250 179 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 MASP2O00187 686 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 TRAF5O00463 557 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 MAN2B1O00754 1011 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 PRODHO43272 600 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 FGFR1P11362 822 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 ECE1P42892 770 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 KRTAP10-11P60412 298 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 MOGSQ13724 837 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 TOB2Q14106 344 aaPredicted RBP4.1□□□□□ -1.75
SKA3-207ENST00000536239 SAFB2Q14151 953 aaKnown RBP eCLIP4.1□□□□□ -1.75
SKA3-207ENST00000536239 GPR19Q15760 415 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 LRSAM1Q6UWE0 723 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 WDR48Q8TAF3 677 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 OSBP2Q969R2 916 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 MIEF2Q96C03 454 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 SGSM3Q96HU1 749 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 AMNQ9BXJ7 453 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 TGIF2Q9GZN2 237 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 RIOX1Q9H6W3 641 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 PACSIN3Q9UKS6 424 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 ATP23Q9Y6H3 246 aa4.1□□□□□ -1.75
SKA3-207ENST00000536239 A0A1W2PRX2 142 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 MPIG6BO95866 241 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 C4BPAP04003 597 aaKnown RBP4.09□□□□□ -1.75
SKA3-207ENST00000536239 AMY2AP04746 511 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 SSBP05455 408 aaKnown RBP eCLIP4.09□□□□□ -1.75
SKA3-207ENST00000536239 PABPC1P11940 636 aaKnown RBP4.09□□□□□ -1.75
SKA3-207ENST00000536239 AMY2BP19961 511 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 ETFBP38117 255 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 MAN2A2P49641 1150 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 STAT5BP51692 787 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 C21orf58P58505 322 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 HERVK_113P62684 666 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 ZKSCAN2Q63HK3 967 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 GRAMD4Q6IC98 578 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 NSMFQ6X4W1 530 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 GLCCI1Q86VQ1 547 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 VRK3Q8IV63 474 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 GSPT2Q8IYD1 628 aaKnown RBP4.09□□□□□ -1.75
SKA3-207ENST00000536239 AARSD1Q9BTE6 412 aaKnown RBP4.09□□□□□ -1.75
SKA3-207ENST00000536239 OR10A5Q9H207 317 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 ZNHIT2Q9UHR6 403 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 XDHP47989 1333 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 ASXL2Q76L83 1435 aa4.09□□□□□ -1.75
SKA3-207ENST00000536239 PRAMEF25A6NGN4 478 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 PAK1Q13153 545 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 FIGNQ5HY92 759 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 EP400NLQ6ZTU2 488 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 RHOUQ7L0Q8 258 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 OSTM1Q86WC4 334 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 PTRH1Q86Y79 214 aaKnown RBP4.08□□□□□ -1.76
SKA3-207ENST00000536239 SLC25A43Q8WUT9 341 aaPredicted RBP4.08□□□□□ -1.76
SKA3-207ENST00000536239 LENG9Q96B70 501 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 ADARB2Q9NS39 739 aaKnown RBP4.08□□□□□ -1.76
SKA3-207ENST00000536239 UCKL1Q9NWZ5 548 aa4.08□□□□□ -1.76
SKA3-207ENST00000536239 CTDP1Q9Y5B0 961 aaPredicted RBP4.08□□□□□ -1.76
SKA3-207ENST00000536239 WNT9AO14904 365 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 FAM20BO75063 409 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 STAT3P40763 770 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 ATP2C1P98194 919 aaPredicted RBP4.07□□□□□ -1.76
SKA3-207ENST00000536239 IFRD2Q12894 506 aaPredicted RBP4.07□□□□□ -1.76
SKA3-207ENST00000536239 ADAM15Q13444 863 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 SYCE2Q6PIF2 218 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 DPH6Q7L8W6 267 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 ARHGEF4Q9NR80 690 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 CATSPERZQ9NTU4 200 aa4.07□□□□□ -1.76
SKA3-207ENST00000536239 ZAR1LA6NP61 321 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 KRTAP29-1A8MX34 341 aaPredicted RBP4.06□□□□□ -1.76
SKA3-207ENST00000536239 CLASP2O75122 1294 aaKnown RBP4.06□□□□□ -1.76
SKA3-207ENST00000536239 KRT15P19012 456 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 ADCY7P51828 1080 aa4.06□□□□□ -1.76
SKA3-207ENST00000536239 JAM2P57087 298 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms