RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CLTAP09496 248 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 CCNB1P14635 433 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 SMARCA1P28370 1054 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 RXRBP28702 533 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 GCKP35557 465 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 SKIV2L2P42285 1042 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 RAB27AP51159 221 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 DNA2P51530 1060 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 RWDD2BP57060 319 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 JAM2P57087 298 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 COPS2P61201 443 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 MAP2K1Q02750 393 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 PTK2Q05397 1052 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 COASYQ13057 564 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 BIRC2Q13490 618 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 AUHQ13825 339 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 RAPGEF1Q13905 1077 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 LRRC41Q15345 812 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 PPP2R5EQ16537 467 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 C6orf118Q5T5N4 469 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 UBAP2Q5T6F2 1119 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 DCAF12L1Q5VU92 463 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 SUSD4Q5VX71 490 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 CWF19L1Q69YN2 538 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 NEK8Q86SG6 692 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ERICH1Q86X53 443 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 APLFQ8IW19 511 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 MYOCDQ8IZQ8 938 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 TEX9Q8N6V9 391 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ANKS4BQ8N8V4 417 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 FAM133AQ8N9E0 248 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 RBM46Q8TBY0 533 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 RNF217Q8TC41 542 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 NEK9Q8TD19 979 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ZFAND2BQ8WV99 257 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 LARP4BQ92615 738 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 PRCCQ92733 491 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 UTP4Q969X6 686 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 SPDL1Q96EA4 605 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 CALML4Q96GE6 196 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 FMO2Q99518 471 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 NUDT12Q9BQG2 462 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ERP44Q9BS26 406 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 SPZ1Q9BXG8 430 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 FGFBP2Q9BYJ0 223 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 LRRC27Q9C0I9 530 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 NSRP1Q9H0G5 558 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 DPH5Q9H2P9 285 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 GOLPH3Q9H4A6 298 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ATP8A2Q9NTI2 1148 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 SPATS2LQ9NUQ6 558 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ETAA1Q9NY74 926 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ZFATQ9P243 1243 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 CTNNAL1Q9UBT7 734 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 ADAMTS1Q9UHI8 967 aa7.53□□□□□ -1.2
CPSF7-215ENST00000536145 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 BZW2Q9Y6E2 419 aaKnown RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 COL5A2P05997 1499 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-215ENST00000536145 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.2
CPSF7-215ENST00000536145 PHLPP1O60346 1717 aa7.52□□□□□ -1.2
CPSF7-215ENST00000536145 GPR75-ASB3A0A0A6YYF3 556 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 TULP1O00294 542 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-215ENST00000536145 SLC26A4O43511 780 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 FLOT1O75955 427 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 NPTXRO95502 500 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 STARD3NLO95772 234 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 H2AFZP0C0S5 128 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 PDE6BP35913 854 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 TECP42680 631 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 NOVP48745 357 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 PDE6CP51160 858 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 PPARDQ03181 441 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 CHRNDQ07001 517 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 CCDC15Q0P6D6 951 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 DHX34Q14147 1143 aaKnown RBP7.52□□□□□ -1.21
CPSF7-215ENST00000536145 PDIA5Q14554 519 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 LBRQ14739 615 aaKnown RBP7.52□□□□□ -1.21
CPSF7-215ENST00000536145 TCEAL1Q15170 157 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 EPHA7Q15375 998 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 DIXDC1Q155Q3 683 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 SLC5A9Q2M3M2 681 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 SGSM1Q2NKQ1 1148 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 PARP6Q2NL67 630 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 EDRF1Q3B7T1 1238 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 ODF2Q5BJF6 829 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 FAM133BQ5BKY9 247 aaKnown RBP7.52□□□□□ -1.21
CPSF7-215ENST00000536145 FAM26FQ5R3K3 315 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 ANKRD20A2Q5SQ80 823 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 ANKRD20A1Q5TYW2 823 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 ANKRD20A3Q5VUR7 823 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 RNF43Q68DV7 783 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 ANO7Q6IWH7 933 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 CGB2Q6NT52 195 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 ALKBH5Q6P6C2 394 aaKnown RBP7.52□□□□□ -1.21
CPSF7-215ENST00000536145 VSTM1Q6UX27 236 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 TOM1L2Q6ZVM7 507 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 H2AFVQ71UI9 128 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 DYMQ7RTS9 669 aa7.52□□□□□ -1.21
CPSF7-215ENST00000536145 PNMA8AQ86V59 439 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-215ENST00000536145 EXOC3L1Q86VI1 746 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms