RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 PLPP4Q5VZY2 271 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 MTHFD1LQ6UB35 978 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 WDR87Q6ZQQ6 2873 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 PLPPR4Q7Z2D5 763 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 RAB11FIP4Q86YS3 637 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 MB21D2Q8IYB1 491 aaPredicted RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 NME8Q8N427 588 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 SRBD1Q8N5C6 995 aaKnown RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 VN1R2Q8NFZ6 395 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 PPP1R16BQ96T49 567 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 CDCA3Q99618 268 aaPredicted RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 ADAM2Q99965 735 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 TCF25Q9BQ70 676 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 IRF2BPLQ9H1B7 796 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 ATP6V0A4Q9HBG4 840 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 LY9Q9HBG7 655 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 C1orf112Q9NSG2 853 aa9.18□□□□□ -0.94
CHFR-211ENST00000535897 PUF60Q9UHX1 559 aaKnown RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 NOC2LQ9Y3T9 749 aaKnown RBP9.18□□□□□ -0.94
CHFR-211ENST00000535897 KDM3AQ9Y4C1 1321 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 H0Y858 1186 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 GPR182O15218 404 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 MGEA5O60502 916 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 CALM1P0DP23 149 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 CALM2P0DP24 149 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 CALM3P0DP25 149 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 FGFR1P11362 822 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 GSPT1P15170 499 aaKnown RBP9.17□□□□□ -0.94
CHFR-211ENST00000535897 LAG3P18627 525 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 CHMLP26374 656 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 KLRC1P26715 233 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 AVPR2P30518 371 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 MCM5P33992 734 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 ZNF76P36508 570 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 SLC26A2P50443 739 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 ODR4Q5SWX8 454 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 FAM160B1Q5W0V3 765 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 PDE12Q6L8Q7 609 aaKnown RBP9.17□□□□□ -0.94
CHFR-211ENST00000535897 SLC24A5Q71RS6 500 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 CKAP2LQ8IYA6 745 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 ABI1Q8IZP0 508 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 COLGALT1Q8NBJ5 622 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 ATP8B4Q8TF62 1192 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 PGBD1Q96JS3 809 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 MXRA8Q9BRK3 442 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 ERVK-5Q9HDB9 667 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 RGS18Q9NS28 235 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 TYW1Q9NV66 732 aaKnown RBP9.17□□□□□ -0.94
CHFR-211ENST00000535897 HCSTQ9UBK5 93 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 ST3GAL5Q9UNP4 418 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 SLC12A7Q9Y666 1083 aa9.17□□□□□ -0.94
CHFR-211ENST00000535897 NFASCO94856 1347 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 PDGFBP01127 241 aaPredicted RBP9.16□□□□□ -0.94
CHFR-211ENST00000535897 ARP10275 920 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 PDE4AP27815 886 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 NAPAP54920 295 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 KRT17Q04695 432 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 ITGB3BPQ13352 177 aaPredicted RBP9.16□□□□□ -0.94
CHFR-211ENST00000535897 MTMR3Q13615 1198 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 KIZQ2M2Z5 673 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 CES5AQ6NT32 575 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 ANKRD54Q6NXT1 300 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 TRMT1LQ7Z2T5 733 aaKnown RBP9.16□□□□□ -0.94
CHFR-211ENST00000535897 TMC7Q7Z402 723 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 MICU3Q86XE3 530 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 TMTC2Q8N394 836 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 METTL13Q8N6R0 699 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 RNF169Q8NCN4 708 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 CYP2W1Q8TAV3 490 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 TMEM40Q8WWA1 233 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 SUSD6Q92537 303 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 MRPS27Q92552 414 aaKnown RBP9.16□□□□□ -0.94
CHFR-211ENST00000535897 ASIC4Q96FT7 647 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 OSMRQ99650 979 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 AGO4Q9HCK5 861 aaKnown RBP9.16□□□□□ -0.94
CHFR-211ENST00000535897 TMEM161AQ9NX61 479 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 TCEAL9Q9UHQ7 104 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 NR2E1Q9Y466 385 aa9.16□□□□□ -0.94
CHFR-211ENST00000535897 RBM8AQ9Y5S9 174 aaKnown RBP9.16□□□□□ -0.94
CHFR-211ENST00000535897 HIDE1A8MVS5 230 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 C9IYK1 514 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 SH2B2O14492 632 aaPredicted RBP9.15□□□□□ -0.94
CHFR-211ENST00000535897 SGSM2O43147 1006 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 HBP1O60381 514 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 HOXB8P17481 243 aaPredicted RBP9.15□□□□□ -0.94
CHFR-211ENST00000535897 PPM1AP35813 382 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 PBX3P40426 434 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 ADCY7P51828 1080 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 CEP55Q53EZ4 464 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 MIS18BP1Q6P0N0 1132 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 PDXDC2PQ6P474 469 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 SYNE3Q6ZMZ3 975 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 TMTC3Q6ZXV5 915 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 KIAA0319LQ8IZA0 1049 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 FANCBQ8NB91 859 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 TMEM87AQ8NBN3 555 aa9.15□□□□□ -0.94
CHFR-211ENST00000535897 KREMEN2Q8NCW0 462 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms