RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 GRXCR2A6NFK2 248 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 GAS7O60861 476 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 ATG7O95352 703 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 MMP1P03956 469 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 RPS6KB1P23443 525 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 CDC27P30260 824 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 SFNP31947 248 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 HSPA4P34932 840 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 CLK2P49760 499 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 SSRP1Q08945 709 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 TYW1BQ6NUM6 668 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 ABHD15Q6UXT9 468 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 SLC24A5Q71RS6 500 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 FAM178BQ8IXR5 827 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 NEK9Q8TD19 979 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 CLP1Q92989 425 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 UIMC1Q96RL1 719 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 PCYT2Q99447 389 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 AGO3Q9H9G7 860 aaKnown RBP14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 ATP6V0A4Q9HBG4 840 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 CYP46A1Q9Y6A2 500 aa14.98□□□□□ -0.01
CLSTN3-205ENST00000535452 PRUNE2Q8WUY3 3088 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 CHD9Q3L8U1 2897 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 FAM86B1E9PN63 330 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 MARCH6O60337 910 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 CDKL5O76039 1030 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 FAM86B2P0C5J1 330 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 IL9P15248 144 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 DNM2P50570 870 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 JAK3P52333 1124 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 CRYBB1P53674 252 aaPredicted RBP14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 CDC42EP1Q00587 391 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 CCDC60Q8IWA6 550 aaPredicted RBP14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 THNSL1Q8IYQ7 743 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 TMEM87AQ8NBN3 555 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 TEKT3Q9BXF9 490 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 SH3GLB2Q9NR46 395 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 GABBR1Q9UBS5 961 aa14.97□□□□□ -0.01
CLSTN3-205ENST00000535452 IGKV6D-21A0A0A0MT36 114 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 TBKBP1A7MCY6 615 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 GRM6O15303 877 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 EIF5BO60841 1220 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 USP11P51784 963 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 CCT2P78371 535 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 UBE3AQ05086 875 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 TBC1D8BQ0IIM8 1120 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 FUT2Q10981 343 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 TMEM266Q2M3C6 531 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 RALGAPA2Q2PPJ7 1873 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 PHKBQ93100 1093 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 ZNF689Q96CS4 500 aaPredicted RBP14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 ADAM2Q99965 735 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 EPHX3Q9H6B9 360 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 ALG13Q9NP73 1137 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 DISC1Q9NRI5 854 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 ST3GAL5Q9UNP4 418 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 PLAGL2Q9UPG8 496 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 SNX14Q9Y5W7 946 aa14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 MRPL42Q9Y6G3 142 aaKnown RBP14.96□□□□□ -0.01
CLSTN3-205ENST00000535452 EPB41L2O43491 1005 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 CHMP2AO43633 222 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 DKC1O60832 514 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 GPR37L1O60883 481 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 PPFIA3O75145 1194 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 CCNE2O96020 404 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 CPA1P15085 419 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 LAG3P18627 525 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 KRT17Q04695 432 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 KIZQ2M2Z5 673 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 LRCH2Q5VUJ6 765 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 GALNT17Q6IS24 598 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 PDE12Q6L8Q7 609 aaKnown RBP14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 ZBTB10Q96DT7 871 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 PPP1R16BQ96T49 567 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 RIT2Q99578 217 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 OSMRQ99650 979 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 LRFN3Q9BTN0 628 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 OSBPL7Q9BZF2 842 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 DACT1Q9NYF0 836 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 CD207Q9UJ71 328 aa14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 MAFBQ9Y5Q3 323 aaPredicted RBP14.95□□□□□ -0.02
CLSTN3-205ENST00000535452 CARNS1A5YM72 827 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 PI4K2BG5E9Z4 385 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 DCXO43602 365 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 DEXIO95424 95 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 OATP04181 439 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 IFNAR1P17181 557 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 PPM1AP35813 382 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 PLA2G5P39877 138 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 SMAD4Q13485 552 aaKnown RBP14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 CLUL1Q15846 466 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 EFCAB12Q6NXP0 572 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 RUFY3Q7L099 469 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 MIER3Q7Z3K6 550 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 ADHFE1Q8IWW8 467 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 FAM177A1Q8N128 213 aaPredicted RBP14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 FBXL16Q8N461 479 aa14.94□□□□□ -0.02
CLSTN3-205ENST00000535452 KLHL23Q8NBE8 558 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms