RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 USP17L24Q0WX57 530 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 PPHLN1Q8NEY8 458 aaKnown RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 DAAM1Q9Y4D1 1078 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 LAD1O00515 517 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 ZSCAN9O15535 394 aaPredicted RBP13.58□□□□□ -0.24
SPG11-203ENST00000535302 ACSL3O95573 720 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 ECEL1O95672 775 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 SETSIPP0DME0 302 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 MYBP10242 640 aa13.58□□□□□ -0.24
SPG11-203ENST00000535302 FRA10AC1Q70Z53 315 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 TTLL11Q8NHH1 800 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 OXER1Q8TDS5 423 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
SPG11-203ENST00000535302 PRR36Q9H6K5 1346 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 CRKP46108 304 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 GLE1Q53GS7 698 aaKnown RBP13.57□□□□□ -0.24
SPG11-203ENST00000535302 WDR11Q9BZH6 1224 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 NPHP4O75161 1426 aaPredicted RBP13.57□□□□□ -0.24
SPG11-203ENST00000535302 A0A1W2PQ27 194 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 A0A1W2PQ64 194 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 A0A1W2PQD8 194 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 IL9RQ01113 521 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 SLC7A5P2Q9GIP4 190 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 PRPF3O43395 683 aaKnown RBP13.57□□□□□ -0.24
SPG11-203ENST00000535302 SRGAP2BP0DMP2 458 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 ARL4AP40617 200 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 STAT3P40763 770 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 SF3B3Q15393 1217 aaKnown RBP13.57□□□□□ -0.24
SPG11-203ENST00000535302 PNMA6FA0A0J9YX94 578 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 KCNV2Q8TDN2 545 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 ZMAT2Q96NC0 199 aaKnown RBP13.57□□□□□ -0.24
SPG11-203ENST00000535302 CCDC90BQ9GZT6 254 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 NLRP1Q9C000 1473 aa13.57□□□□□ -0.24
SPG11-203ENST00000535302 PRPSAP2O60256 369 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 SRGAP2O75044 1071 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 TTC25Q96NG3 672 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 HEMGNQ9BXL5 484 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 BPIFB4P59827 614 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 DHX9Q08211 1270 aaKnown RBP13.56□□□□□ -0.24
SPG11-203ENST00000535302 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 DYDC2Q96IM9 177 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 MIS12Q9H081 205 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 USP17L10C9JJH3 530 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 GRAMD1BQ3KR37 738 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 CEP70Q8NHQ1 597 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 RNF139Q8WU17 664 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 RWDD2AQ9UIY3 292 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 XPOTO43592 962 aaKnown RBP13.56□□□□□ -0.24
SPG11-203ENST00000535302 SLFN14P0C7P3 912 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 MXI1P50539 228 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 GABPB1Q06547 395 aaPredicted RBP13.56□□□□□ -0.24
SPG11-203ENST00000535302 BBS9Q3SYG4 887 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 TMCO5AQ8N6Q1 288 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 RFWD2Q8NHY2 731 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 ATXN7L3BQ96GX2 97 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 GPR108Q9NPR9 543 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 CDC23Q9UJX2 597 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 PCDHA6Q9UN73 950 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 PCDHA8Q9Y5H6 950 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 ZHX2Q9Y6X8 837 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 ANXA13P27216 316 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 IREB2P48200 963 aaKnown RBP13.56□□□□□ -0.24
SPG11-203ENST00000535302 PSMD2Q13200 908 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 ACCSLQ4AC99 568 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 PPP6R3Q5H9R7 873 aaPredicted RBP13.56□□□□□ -0.24
SPG11-203ENST00000535302 PSDA5PKW4 1024 aaPredicted RBP13.56□□□□□ -0.24
SPG11-203ENST00000535302 H0Y3Z8 333 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 C1orf228Q6PIY5 440 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 AK8Q96MA6 479 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 TMEM206Q9H813 350 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 PNMA2Q9UL42 364 aa13.56□□□□□ -0.24
SPG11-203ENST00000535302 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 FAM95CA0A1B0GW59 222 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 E9PMD0 336 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 SUN1O94901 812 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 PCP11498 1178 aaKnown RBP13.55□□□□□ -0.24
SPG11-203ENST00000535302 MYO1EQ12965 1108 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 RESTQ13127 1097 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 E2F4Q16254 413 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 C11orf74Q86VG3 221 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 ERBB4Q15303 1308 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 ECE2O60344 883 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 ANP32DO95626 131 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 KLHL29Q96CT2 875 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 STRIP2Q9ULQ0 834 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.55□□□□□ -0.24
SPG11-203ENST00000535302 SCAF8Q9UPN6 1271 aaKnown RBP13.55□□□□□ -0.24
SPG11-203ENST00000535302 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 MT-ND3P03897 115 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 FAM47EQ6ZV65 393 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 SCN4BQ8IWT1 228 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 TAGAPQ8N103 731 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 CCDC197Q8NCU1 140 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 TDRD7Q8NHU6 1098 aaKnown RBP13.55□□□□□ -0.24
SPG11-203ENST00000535302 TTC17Q96AE7 1141 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 NEUROG2Q9H2A3 272 aa13.55□□□□□ -0.24
SPG11-203ENST00000535302 BSDC1Q9NW68 430 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms