RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 ZNF18P17022 549 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 TRAPPC10P48553 1259 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 FSTL1Q12841 308 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 ABTB1Q969K4 478 aaPredicted RBP9.87□□□□□ -0.83
SF3B2-216ENST00000534765 FERMT2Q96AC1 680 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 KDM4CQ9H3R0 1056 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 TBC1D12O60347 775 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 TAF11Q15544 211 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 FILIP1LQ4L180 1135 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 FAM133BQ5BKY9 247 aaKnown RBP9.87□□□□□ -0.83
SF3B2-216ENST00000534765 ETNPPLQ8TBG4 499 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 HDAC9Q9UKV0 1011 aa9.87□□□□□ -0.83
SF3B2-216ENST00000534765 GOLGA6L10A0A0M3HER8 536 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 AKR1B15C9JRZ8 316 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 PYGBP11216 843 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 PRCPP42785 496 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 STK4Q13043 487 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 NNTQ13423 1086 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 TCERG1LQ5VWI1 586 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 FAM114A1Q8IWE2 563 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 CCDC63Q8NA47 563 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 OSBPL1AQ9BXW6 950 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 VCPKMTQ9H867 229 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 TRPC6Q9Y210 931 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 IGLV3-22A0A075B6J6 115 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 FANCGO15287 622 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 MED24O75448 989 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 PAPOLAP51003 745 aaKnown RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 C2orf54Q08AI8 447 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 FCHSD1Q86WN1 690 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 CLEC4DQ8WXI8 215 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 ANO3Q9BYT9 981 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 KBTBD4Q9NVX7 518 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 WDR81Q562E7 1941 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 MYMKA6NI61 221 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 SMIM23A6NLE4 172 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 POTECB2RU33 542 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 EVI5O60447 810 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 SYF2O95926 243 aaKnown RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 CTCFP49711 727 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 RNASE9P60153 205 aaKnown RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 IKQ13123 557 aaPredicted RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 KIAA0895Q8NCT3 520 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 EHBP1Q8NDI1 1231 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 COG1Q8WTW3 980 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 CCDC47Q96A33 483 aaKnown RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 BPIFA3Q9BQP9 254 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 VPS33BQ9H267 617 aa9.86□□□□□ -0.83
SF3B2-216ENST00000534765 RANBP17Q9H2T7 1088 aaKnown RBP9.86□□□□□ -0.83
SF3B2-216ENST00000534765 MACROD2A1Z1Q3 448 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 MEIS1O00470 390 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 PRPHP41219 470 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 STAT2P52630 851 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 SMTNP53814 917 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 ARL6IP4Q66PJ3 421 aaKnown RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 ZNF473Q8WTR7 871 aaKnown RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 BORCS6Q96GS4 357 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 KCNMB3Q9NPA1 279 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 HOMER2Q9NSB8 354 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 MYO1AQ9UBC5 1043 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 DDX25Q9UHL0 483 aaKnown RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 E9PMD0 336 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 CALCRLQ16602 461 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 C11orf91Q3C1V1 193 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 FKBP1CQ5VVH2 108 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 NAA35Q5VZE5 725 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 KRT25Q7Z3Z0 450 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 CACNA2D3Q8IZS8 1091 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 RASSF8Q8NHQ8 419 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 CUL5Q93034 780 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 ARL8AQ96BM9 186 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 CEP131Q9UPN4 1083 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 NFE2L3Q9Y4A8 694 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 KIAA1217Q5T5P2 1943 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 ASTN1O14525 1302 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 POTEB3A0JP26 581 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 VCAM1P19320 739 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 GNA11P29992 359 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 LONP1P36776 959 aaKnown RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 CCT6AP40227 531 aaKnown RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 SPP2Q13103 211 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 POTEBQ6S5H4 581 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 CABP7Q86V35 215 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 RNF168Q8IYW5 571 aaPredicted RBP9.85□□□□□ -0.83
SF3B2-216ENST00000534765 NOD2Q9HC29 1040 aa9.85□□□□□ -0.83
SF3B2-216ENST00000534765 ZNF189O75820 626 aaPredicted RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ANP32DO95626 131 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 CFBP00751 764 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 OATP04181 439 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 TUBBP07437 444 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 SPATA31C1P0DKV0 1188 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 RAB27AP51159 221 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ARHGAP4P98171 946 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 GRIK3Q13003 919 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ARSHQ5FYA8 562 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ACBD5Q5T8D3 534 aaPredicted RBP9.84□□□□□ -0.83
SF3B2-216ENST00000534765 SPECC1LQ69YQ0 1117 aa9.84□□□□□ -0.83
SF3B2-216ENST00000534765 ARHGAP22Q7Z5H3 698 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms