RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PHKBQ93100 1093 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-217ENST00000534699 COL25A1Q9BXS0 654 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-217ENST00000534699 AAASQ9NRG9 546 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 MSH4O15457 936 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 SORBS3O60504 671 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 BAG4O95429 457 aaKnown RBP11.73□□□□□ -0.53
CSDE1-217ENST00000534699 CPA1P15085 419 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 FAM189BP81408 668 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 LRCH2Q5VUJ6 765 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 SWSAP1Q6NVH7 229 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 CCDC60Q8IWA6 550 aaPredicted RBP11.73□□□□□ -0.53
CSDE1-217ENST00000534699 TMEM192Q8IY95 271 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 TBCKQ8TEA7 893 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 PPP2R3CQ969Q6 453 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 TRAIPQ9BWF2 469 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 CHST12Q9NRB3 414 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 RGS18Q9NS28 235 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 STK39Q9UEW8 545 aa11.73□□□□□ -0.53
CSDE1-217ENST00000534699 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
CSDE1-217ENST00000534699 CCDC194A0A1B0GVG4 234 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 DGKIO75912 1065 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 MYOGP15173 224 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 CCT2P78371 535 aaKnown RBP11.72□□□□□ -0.53
CSDE1-217ENST00000534699 NEK8Q86SG6 692 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 ZNF410Q86VK4 478 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 KIAA0319LQ8IZA0 1049 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 MYOCDQ8IZQ8 938 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 STK24Q9Y6E0 443 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 MARK3P27448 753 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 BMPR1AP36894 532 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 DNM2P50570 870 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 TARBP2Q15633 366 aaKnown RBP11.72□□□□□ -0.53
CSDE1-217ENST00000534699 HLA-CQ95604 372 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 PGBD1Q96JS3 809 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 SUGCTQ9HAC7 445 aa11.72□□□□□ -0.53
CSDE1-217ENST00000534699 ZMYM2Q9UBW7 1377 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 CTSHP09668 335 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 GHRP10912 638 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 PSMC5P62195 406 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 MIER3Q7Z3K6 550 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 ETNPPLQ8TBG4 499 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 PKD2L1Q9P0L9 805 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 GABBR1Q9UBS5 961 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 PADI3Q9ULW8 664 aa11.71□□□□□ -0.53
CSDE1-217ENST00000534699 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 IGKV6-21A0A0C4DH24 114 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 TNFRSF10AO00220 468 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 ASAP2O43150 1006 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 RPS6KA5O75582 802 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 ATP4AP20648 1035 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 MUTP22033 750 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 RFC5P40937 340 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 SCRN1Q12765 414 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 NPY5RQ15761 445 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 EPC2Q52LR7 807 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 SKAP1Q86WV1 359 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 CKAP2LQ8IYA6 745 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 GTF3C6Q969F1 213 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.54
CSDE1-217ENST00000534699 KCNMB3Q9NPA1 279 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 LZTS1Q9Y250 596 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 CENPFP49454 3210 aa11.71□□□□□ -0.54
CSDE1-217ENST00000534699 EVPLQ92817 2033 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 FNDC1Q4ZHG4 1894 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 XRCC6P12956 609 aaKnown RBP eCLIP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 KRT2P35908 639 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 POU5F1BQ06416 359 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 GPM6BQ13491 265 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 DSC3Q14574 896 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 EPHA7Q15375 998 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 PPP1R13LQ8WUF5 828 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 SH2B1Q9NRF2 756 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 TMEM161AQ9NX61 479 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 DDX25Q9UHL0 483 aaKnown RBP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 LRFN2Q9ULH4 789 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 EDIL3O43854 480 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 LYPLA2O95372 231 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 EOMESO95936 686 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 C4orf19Q8IY42 314 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 MICALL1Q8N3F8 863 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 TCP11Q8WWU5 503 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 CDCA3Q99618 268 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 NCOA5Q9HCD5 579 aaKnown RBP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 DACT1Q9NYF0 836 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 ORC3Q9UBD5 711 aaPredicted RBP11.7□□□□□ -0.54
CSDE1-217ENST00000534699 TELO2Q9Y4R8 837 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 PCDHB7Q9Y5E2 793 aa11.7□□□□□ -0.54
CSDE1-217ENST00000534699 GPR32O75388 356 aa11.69□□□□□ -0.54
CSDE1-217ENST00000534699 MMP1P03956 469 aa11.69□□□□□ -0.54
CSDE1-217ENST00000534699 P4HBP07237 508 aaKnown RBP11.69□□□□□ -0.54
CSDE1-217ENST00000534699 IGBP1P78318 339 aa11.69□□□□□ -0.54
CSDE1-217ENST00000534699 HMGN5P82970 282 aaKnown RBP11.69□□□□□ -0.54
CSDE1-217ENST00000534699 TRIM29Q14134 588 aa11.69□□□□□ -0.54
CSDE1-217ENST00000534699 OTUD6AQ7L8S5 288 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms