RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 MIIPQ5JXC2 388 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 SOGA3Q5TF21 947 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 ERICH1Q86X53 443 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 CCDC155Q8N6L0 562 aa20.87■□□□□ 0.93
SMPD1-210ENST00000534405 NOC3LQ8WTT2 800 aaKnown RBP20.87■□□□□ 0.93
SMPD1-210ENST00000534405 ESYT3A0FGR9 886 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 TXKP42681 527 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 LBRQ14739 615 aaKnown RBP20.86■□□□□ 0.93
SMPD1-210ENST00000534405 CLEC10AQ8IUN9 316 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 REXO1Q8N1G1 1221 aaKnown RBP20.86■□□□□ 0.93
SMPD1-210ENST00000534405 COA7Q96BR5 231 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 DTNBP1Q96EV8 351 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 RIOX1Q9H6W3 641 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 ZSCAN5CA6NGD5 496 aaPredicted RBP20.86■□□□□ 0.93
SMPD1-210ENST00000534405 ATP2A2P16615 1042 aaKnown RBP20.86■□□□□ 0.93
SMPD1-210ENST00000534405 ATP2B4P23634 1241 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 MXRA7P84157 204 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 GRB10Q13322 594 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 SGSM1Q2NKQ1 1148 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 CACNA2D4Q7Z3S7 1137 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 CERKQ8TCT0 537 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 CENPTQ96BT3 561 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 SH2D4AQ9H788 454 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 BLOC1S4Q9NUP1 217 aa20.86■□□□□ 0.93
SMPD1-210ENST00000534405 GAKO14976 1311 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 ASAP2O43150 1006 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 SLC37A4O43826 429 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 EVI5O60447 810 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 ALDH5A1P51649 535 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 MRPS35P82673 323 aaKnown RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 ZNF844Q08AG5 666 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 USP4Q13107 963 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 TAF11Q15544 211 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 FAM163AQ96GL9 167 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 MTMR9Q96QG7 549 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 SEMA6BQ9H3T3 888 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 RNF14Q9UBS8 474 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 G3BP2Q9UN86 482 aaKnown RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 C2CD2Q9Y426 696 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 SMARCA1P28370 1054 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 SPICE1Q8N0Z3 855 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 LRRC47Q8N1G4 583 aaKnown RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 EIF1ADQ8N9N8 165 aaKnown RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 ZNHIT6Q9NWK9 470 aaKnown RBP20.85■□□□□ 0.93
SMPD1-210ENST00000534405 BLOC1S6Q9UL45 172 aa20.85■□□□□ 0.93
SMPD1-210ENST00000534405 AFF2P51816 1311 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 THSD7AQ9UPZ6 1657 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 GOLGA6L10A0A0M3HER8 536 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
SMPD1-210ENST00000534405 TDP2O95551 362 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 PLCG2P16885 1265 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 TRIM21P19474 475 aaKnown RBP20.84■□□□□ 0.93
SMPD1-210ENST00000534405 HSD17B3P37058 310 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 EIF6P56537 245 aaKnown RBP20.84■□□□□ 0.93
SMPD1-210ENST00000534405 ERMARDQ5T6L9 678 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 ANO7Q6IWH7 933 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 PIGWQ7Z7B1 504 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 TBC1D16Q8TBP0 767 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 PNMA5Q96PV4 448 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 PIDD1Q9HB75 910 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 LRWD1Q9UFC0 647 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 A0A1B0GVG6 124 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 ESYT2A0FGR8 921 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 BICDL2A1A5D9 508 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 SPDYE5A6NIY4 337 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 CXCR5P32302 372 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 KCNJ2P63252 427 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 CNOT10Q9H9A5 744 aaKnown RBP20.84■□□□□ 0.93
SMPD1-210ENST00000534405 AGAP1Q9UPQ3 857 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 DAGLAQ9Y4D2 1042 aa20.84■□□□□ 0.93
SMPD1-210ENST00000534405 MYMKA6NI61 221 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 MTIF2P46199 727 aaKnown RBP20.83■□□□□ 0.93
SMPD1-210ENST00000534405 CDK17Q00537 523 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 CYP27A1Q02318 531 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 PICALMQ13492 652 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 CFAP221Q4G0U5 840 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 ODF2Q5BJF6 829 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 CMPK2Q5EBM0 449 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 NUDT12Q9BQG2 462 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 NOC4LQ9BVI4 516 aaKnown RBP20.83■□□□□ 0.93
SMPD1-210ENST00000534405 FAM129AQ9BZQ8 928 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 TRIM4Q9C037 500 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 MTMR4Q9NYA4 1195 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 USP21Q9UK80 565 aa20.83■□□□□ 0.93
SMPD1-210ENST00000534405 UPP2O95045 317 aa20.83■□□□□ 0.92
SMPD1-210ENST00000534405 GYS1P13807 737 aa20.83■□□□□ 0.92
SMPD1-210ENST00000534405 TRPM8Q7Z2W7 1104 aa20.83■□□□□ 0.92
SMPD1-210ENST00000534405 ZNF317Q96PQ6 595 aaPredicted RBP20.83■□□□□ 0.92
SMPD1-210ENST00000534405 XPO6Q96QU8 1125 aaKnown RBP20.83■□□□□ 0.92
SMPD1-210ENST00000534405 POTEMA6NI47 508 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 ZNF263O14978 683 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 MAP3K13O43283 966 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 MOCS3O95396 460 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 SERPINB2P05120 415 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 AKR1B1P15121 316 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 CALCRLQ16602 461 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 CCDC96Q2M329 555 aa20.82■□□□□ 0.92
SMPD1-210ENST00000534405 ZSCAN29Q8IWY8 852 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-210ENST00000534405 PRCCQ92733 491 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms