RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 FANCD2Q9BXW9 1451 aa4.58□□□□□ -1.68
CSMD3-210ENST00000534172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-210ENST00000534172 FAM90A27PA6NNH2 459 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 KRT37O76014 449 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 KIF11P52732 1056 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 GRIN1Q05586 938 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 STRN3Q13033 797 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 TIGD7Q6NT04 549 aaPredicted RBP4.57□□□□□ -1.68
CSMD3-210ENST00000534172 SPATS2Q86XZ4 545 aaKnown RBP4.57□□□□□ -1.68
CSMD3-210ENST00000534172 KYQ8NBH2 561 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 RELTQ969Z4 430 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 THG1LQ9NWX6 298 aaKnown RBP4.57□□□□□ -1.68
CSMD3-210ENST00000534172 SHTN1A0MZ66 631 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 C8BP07358 591 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 GNALP38405 381 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 RAP1GAPP47736 663 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 RHBDL3P58872 404 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 SEPT7Q16181 437 aaKnown RBP4.57□□□□□ -1.68
CSMD3-210ENST00000534172 CR1LQ2VPA4 569 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 ATP13A4Q4VNC1 1196 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 TTLL7Q6ZT98 887 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 LHFPL2Q6ZUX7 228 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 LINC00482Q8N8I6 264 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 CHTF18Q8WVB6 975 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 WNT8AQ9H1J5 351 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 GCM1Q9NP62 436 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 CNOT6Q9ULM6 557 aaKnown RBP4.57□□□□□ -1.68
CSMD3-210ENST00000534172 PHLDB1Q86UU1 1377 aa4.57□□□□□ -1.68
CSMD3-210ENST00000534172 ETV2O00321 342 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-210ENST00000534172 KIF3BO15066 747 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 SCGB1D2O95969 90 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 AOAHP28039 575 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 RAB27AP51159 221 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 MTMR1Q13613 665 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 TMEM132BQ14DG7 1078 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 MAP9Q49MG5 647 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 NXPE1Q8N323 547 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 SMARCC2Q8TAQ2 1214 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 WDR66Q8TBY9 1149 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 FOXB1Q99853 325 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 TOMM22Q9NS69 142 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 TELO2Q9Y4R8 837 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 HCFC2Q9Y5Z7 792 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 PMF1-BGLAPU3KQ54 211 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 ZNF839A8K0R7 811 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 ACOT7O00154 380 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 MAFO75444 373 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-210ENST00000534172 LTFP02788 710 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 PTGS1P23219 599 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 CD276Q5ZPR3 534 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 CCSAPQ6IQ19 270 aaPredicted RBP4.56□□□□□ -1.68
CSMD3-210ENST00000534172 FRMD7Q6ZUT3 714 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 ZNF610Q8N9Z0 462 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 HIPK4Q8NE63 616 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 SMAD5Q99717 465 aaKnown RBP4.56□□□□□ -1.68
CSMD3-210ENST00000534172 PUS7LQ9H0K6 701 aaKnown RBP4.56□□□□□ -1.68
CSMD3-210ENST00000534172 SLC5A4Q9NY91 659 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 FBXO10Q9UK96 956 aa4.56□□□□□ -1.68
CSMD3-210ENST00000534172 GOLGA6L22H0YM25 854 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 GPR39O43194 453 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ATF2P15336 505 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ZEB1P37275 1124 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-210ENST00000534172 NEK2P51955 445 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 CNKSR3Q6P9H4 555 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ATG14Q6ZNE5 492 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 PHYKPLQ8IUZ5 450 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 SMC5Q8IY18 1101 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 DTX3Q8N9I9 347 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 MTMR8Q96EF0 704 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 GPR101Q96P66 508 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-210ENST00000534172 KCTD3Q9Y597 815 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ZNF891A8MT65 544 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-210ENST00000534172 FBXO21O94952 628 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 YBX3P16989 372 aaKnown RBP eCLIP4.55□□□□□ -1.68
CSMD3-210ENST00000534172 STAT5AP42229 794 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ROM1Q03395 351 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ITKQ08881 620 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 TTC38Q5R3I4 469 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 OGFOD2Q6N063 350 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 RASSF3Q86WH2 238 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 RSAD2Q8WXG1 361 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 SLC5A5Q92911 643 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 MAML3Q96JK9 1138 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 GBP4Q96PP9 640 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 C11orf84Q9BUA3 381 aaPredicted RBP4.55□□□□□ -1.68
CSMD3-210ENST00000534172 BTBD2Q9BX70 525 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 CD320Q9NPF0 282 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 GALNT8Q9NY28 637 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 ZIM2Q9NZV7 527 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 SMG5Q9UPR3 1016 aaKnown RBP4.55□□□□□ -1.68
CSMD3-210ENST00000534172 TSPOAP1O95153 1857 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 GLI2P10070 1586 aa4.55□□□□□ -1.68
CSMD3-210ENST00000534172 AKAP10O43572 662 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 ADCYAP1R1P41586 468 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 EPHB3P54753 998 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 BIRC2Q13490 618 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 STAT4Q14765 748 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 CPZQ66K79 652 aa4.54□□□□□ -1.68
CSMD3-210ENST00000534172 CREB3L3Q68CJ9 461 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms