RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PIK3CDO00329 1044 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 MEIS2O14770 477 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 ITGB5P18084 799 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 LAG3P18627 525 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 TMEM266Q2M3C6 531 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 TPRNQ4KMQ1 711 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 LLGL2Q6P1M3 1020 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 USP17L6PQ6QN14 398 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 SLC24A5Q71RS6 500 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 NME8Q8N427 588 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 TCF25Q9BQ70 676 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 DSCC1Q9BVC3 393 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 ERVK-5Q9HDB9 667 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 C1orf112Q9NSG2 853 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 PUF60Q9UHX1 559 aaKnown RBP8.97□□□□□ -0.97
NXF1-215ENST00000533440 FRYLO94915 3013 aa8.97□□□□□ -0.97
NXF1-215ENST00000533440 NCOR2Q9Y618 2525 aa8.96□□□□□ -0.97
NXF1-215ENST00000533440 EPG5Q9HCE0 2579 aa8.96□□□□□ -0.97
NXF1-215ENST00000533440 ASGR2P07307 311 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 NPR3P17342 541 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 AOC1P19801 751 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 PDE4AP27815 886 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 MTHFRP42898 656 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 FAM189BP81408 668 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 KRT76Q01546 638 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 TROAPQ12815 778 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 NFX1Q12986 1120 aaKnown RBP8.96□□□□□ -0.98
NXF1-215ENST00000533440 PLCB4Q15147 1175 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 IMMTQ16891 758 aaKnown RBP8.96□□□□□ -0.98
NXF1-215ENST00000533440 CES5AQ6NT32 575 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 CYB5R4Q7L1T6 521 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 CCDC105Q8IYK2 499 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 SMARCC2Q8TAQ2 1214 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 TRAPPC12Q8WVT3 735 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 TNPO1Q92973 898 aaKnown RBP8.96□□□□□ -0.98
NXF1-215ENST00000533440 RMDN1Q96DB5 314 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 ADAM2Q99965 735 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 MFSD1Q9H3U5 465 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 ELAC1Q9H777 363 aaKnown RBP8.96□□□□□ -0.98
NXF1-215ENST00000533440 ENTPD7Q9NQZ7 604 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 TMEM161AQ9NX61 479 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 ZBTB47Q9UFB7 747 aaPredicted RBP8.96□□□□□ -0.98
NXF1-215ENST00000533440 USTQ9Y2C2 406 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 NOC2LQ9Y3T9 749 aaKnown RBP8.96□□□□□ -0.98
NXF1-215ENST00000533440 HCFC2Q9Y5Z7 792 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 UBIAD1Q9Y5Z9 338 aa8.96□□□□□ -0.98
NXF1-215ENST00000533440 DENND3A2RUS2 1198 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 MAFGO15525 162 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 PI15O43692 258 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 RPS6KA5O75582 802 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 ARP10275 920 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 FGFR1P11362 822 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 IBSPP21815 317 aaPredicted RBP8.95□□□□□ -0.98
NXF1-215ENST00000533440 ANGPT1Q15389 498 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 ODR4Q5SWX8 454 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 KIAA1841Q6NSI8 718 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 MTHFD1LQ6UB35 978 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 KCNT2Q6UVM3 1135 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 LRRC55Q6ZSA7 311 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 PLPPR4Q7Z2D5 763 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 DGLUCYQ7Z3D6 616 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 TMC7Q7Z402 723 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 MRPL43Q8N983 215 aaKnown RBP8.95□□□□□ -0.98
NXF1-215ENST00000533440 TDRD5Q8NAT2 981 aaKnown RBP8.95□□□□□ -0.98
NXF1-215ENST00000533440 FLCNQ8NFG4 579 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 TMEM40Q8WWA1 233 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 CUL5Q93034 780 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 RILPL2Q969X0 211 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 CASD1Q96PB1 797 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 TMEM117Q9H0C3 514 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 SEMA4AQ9H3S1 761 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 CDHR5Q9HBB8 845 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 ATP6V0A4Q9HBG4 840 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 ST3GAL5Q9UNP4 418 aa8.95□□□□□ -0.98
NXF1-215ENST00000533440 KMT2BQ9UMN6 2715 aaPredicted RBP8.95□□□□□ -0.98
NXF1-215ENST00000533440 C2orf71A6NGG8 1288 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 GPR182O15218 404 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 CLASP2O75122 1294 aaKnown RBP8.94□□□□□ -0.98
NXF1-215ENST00000533440 EOMESO95936 686 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 LMNAP02545 664 aaKnown RBP8.94□□□□□ -0.98
NXF1-215ENST00000533440 PPM1AP35813 382 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 KRT17Q04695 432 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 MTMR1Q13613 665 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 DSC3Q14574 896 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 SMC1AQ14683 1233 aaKnown RBP8.94□□□□□ -0.98
NXF1-215ENST00000533440 CWC27Q6UX04 472 aaKnown RBP8.94□□□□□ -0.98
NXF1-215ENST00000533440 KIAA0319LQ8IZA0 1049 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 DTWD2Q8NBA8 298 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 ZNF558Q96NG5 402 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 RTP3Q9BQQ7 232 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 AZI2Q9H6S1 392 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 JPH1Q9HDC5 661 aaPredicted RBP8.94□□□□□ -0.98
NXF1-215ENST00000533440 JADE2Q9NQC1 790 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 RNF19AQ9NV58 838 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 SLC9A2Q9UBY0 812 aa8.94□□□□□ -0.98
NXF1-215ENST00000533440 CEP250Q9BV73 2442 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms