RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 KDM3AQ9Y4C1 1321 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 ATAD5Q96QE3 1844 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 SLC26A4O43511 780 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 ZNF280AP59817 542 aaPredicted RBP19.67■□□□□ 0.74
UBXN1-213ENST00000532904 KLHL30Q0D2K2 578 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 RAPGEF1Q13905 1077 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 ASIC2Q16515 512 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 KIAA0753Q2KHM9 967 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 KCTD16Q68DU8 428 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 CCDC65Q8IXS2 484 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 USP38Q8NB14 1042 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 MBOAT7Q96N66 472 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 FGFBP2Q9BYJ0 223 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 NT5C3AQ9H0P0 336 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 MYOZ2Q9NPC6 264 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 TMEM59LQ9UK28 342 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 CD2APQ9Y5K6 639 aa19.67■□□□□ 0.74
UBXN1-213ENST00000532904 NFKBIEO00221 500 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 NDUFAB1O14561 156 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 MEIS2O14770 477 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 PLA2G6O60733 806 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 FOSP01100 380 aaPredicted RBP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 LIG3P49916 1009 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 TNNC1P63316 161 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 SUGP1Q8IWZ8 645 aaKnown RBP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 EIF1ADQ8N9N8 165 aaKnown RBP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 TMEM39BQ9GZU3 492 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 KCTD10Q9H3F6 313 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 CAP2P40123 477 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 SPATS2Q86XZ4 545 aaKnown RBP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 CRYGNQ8WXF5 182 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 RNPC3Q96LT9 517 aaKnown RBP19.66■□□□□ 0.74
UBXN1-213ENST00000532904 PACSIN1Q9BY11 444 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 ANO3Q9BYT9 981 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 SAMM50Q9Y512 469 aa19.66■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L15C9J2P7 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L13C9JLJ4 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L11C9JVI0 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L18D6R9N7 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L22D6RA61 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L17D6RBQ6 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L19D6RCP7 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L20D6RJB6 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 HSPA9P38646 679 aaKnown RBP19.65■□□□□ 0.74
UBXN1-213ENST00000532904 ATP1A2P50993 1020 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 DNA2P51530 1060 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 GUCY2FP51841 1108 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 STAT2P52630 851 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L24Q0WX57 530 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 IKQ13123 557 aaPredicted RBP19.65■□□□□ 0.74
UBXN1-213ENST00000532904 C10orf76Q5T2E6 689 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 USP17L6PQ6QN14 398 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 MMS22LQ6ZRQ5 1243 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 NELFCDQ8IXH7 590 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 FAM133AQ8N9E0 248 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 ADAMTS1Q9UHI8 967 aa19.65■□□□□ 0.74
UBXN1-213ENST00000532904 PACSIN2Q9UNF0 486 aaPredicted RBP19.65■□□□□ 0.74
UBXN1-213ENST00000532904 RAD51CO43502 376 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 INPP5BP32019 993 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 SCFD1Q8WVM8 642 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 ATP6V1G3Q96LB4 118 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 PAGR1Q9BTK6 254 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 EPN3Q9H201 632 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 TBC1D7Q9P0N9 293 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 PRR12Q9ULL5 1215 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 PCDHA12Q9UN75 941 aa19.64■□□□□ 0.74
UBXN1-213ENST00000532904 SSBP05455 408 aaKnown RBP eCLIP19.64■□□□□ 0.73
UBXN1-213ENST00000532904 NR1D1P20393 614 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 LSP1P33241 339 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 ECE1P42892 770 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 TNFAIP1Q13829 316 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 EDRF1Q3B7T1 1238 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 NBPF9Q3BBW0 867 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 ACER1Q8TDN7 264 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 CHURC1Q8WUH1 139 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 TAF4BQ92750 862 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 KAT2BQ92831 832 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 VCPKMTQ9H867 229 aa19.64■□□□□ 0.73
UBXN1-213ENST00000532904 HMGB1P1B2RPK0 211 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-213ENST00000532904 E9PMD0 336 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 PIK3CDO00329 1044 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 PLA2G4BP0C869 781 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 GTF2A1P52655 376 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-213ENST00000532904 ARID5AQ03989 594 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 PBKQ96KB5 322 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 SGIP1Q9BQI5 828 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 ISCUQ9H1K1 167 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 TAF1DQ9H5J8 278 aaPredicted RBP19.63■□□□□ 0.73
UBXN1-213ENST00000532904 KCNMB3Q9NPA1 279 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 GINM1Q9NU53 330 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 MARCH6O60337 910 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 ASNSP08243 561 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 ADAM9Q13443 819 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 RPS6KA1Q15418 735 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 TRADDQ15628 312 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 LRIG3Q6UXM1 1119 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 GJA10Q969M2 543 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms