RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SLKQ9H2G2 1235 aaPredicted RBP20.16■□□□□ 0.82
SMG1-203ENST00000532700 PADI3Q9ULW8 664 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 PCDHA10Q9Y5I2 948 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 STK36Q9NRP7 1315 aa20.16■□□□□ 0.82
SMG1-203ENST00000532700 MGEA5O60502 916 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 GATMP50440 423 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 SLC26A2P50443 739 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 KRT76Q01546 638 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 Q4G0T1 1027 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 ETNPPLQ8TBG4 499 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 YME1L1Q96TA2 773 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 NOC2LQ9Y3T9 749 aaKnown RBP20.15■□□□□ 0.82
SMG1-203ENST00000532700 COL1A2P08123 1366 aa20.15■□□□□ 0.82
SMG1-203ENST00000532700 KDM3AQ9Y4C1 1321 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 CYP3A7-CYP3A51PA0A087WV96 503 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 STBD1O95210 358 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 VTNP04004 478 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 PSAPP07602 524 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 CYP3A7P24462 503 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 KCNQ1P51787 676 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 CLCN3P51790 818 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 EPC2Q52LR7 807 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 ZNF484Q5JVG2 852 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 LRCH2Q5VUJ6 765 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 CKAP2LQ8IYA6 745 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 SMAP1Q8IYB5 467 aaPredicted RBP20.14■□□□□ 0.81
SMG1-203ENST00000532700 LINC01465Q8N7H1 131 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 ZNF668Q96K58 619 aaPredicted RBP20.14■□□□□ 0.81
SMG1-203ENST00000532700 ASB2Q96Q27 587 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 SH2D3AQ9BRG2 576 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 DISC1Q9NRI5 854 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 GINS2Q9Y248 185 aa20.14■□□□□ 0.81
SMG1-203ENST00000532700 JAK2O60674 1132 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 GAS7O60861 476 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 FOSBP53539 338 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 PRKCEQ02156 737 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 TJAP1Q5JTD0 557 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 IER5Q5VY09 327 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 FBXO22Q8NEZ5 403 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 BBXQ8WY36 941 aaPredicted RBP20.13■□□□□ 0.81
SMG1-203ENST00000532700 NECAB3Q96P71 396 aaPredicted RBP20.13■□□□□ 0.81
SMG1-203ENST00000532700 RIT2Q99578 217 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 SAMM50Q9Y512 469 aa20.13■□□□□ 0.81
SMG1-203ENST00000532700 FNDC1Q4ZHG4 1894 aaPredicted RBP20.13■□□□□ 0.81
SMG1-203ENST00000532700 ARID2Q68CP9 1835 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 WDR64B1ANS9 1081 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 WNT7AO00755 349 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 GTPBP6O43824 516 aaPredicted RBP20.12■□□□□ 0.81
SMG1-203ENST00000532700 GPR32O75388 356 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 NR5A1Q13285 461 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 DRP2Q13474 957 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 NONOQ15233 471 aaKnown RBP eCLIP20.12■□□□□ 0.81
SMG1-203ENST00000532700 KIZQ2M2Z5 673 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 LRRC71Q8N4P6 559 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 NSUN7Q8NE18 718 aaKnown RBP20.12■□□□□ 0.81
SMG1-203ENST00000532700 GTF3C6Q969F1 213 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 ZNF689Q96CS4 500 aaPredicted RBP20.12■□□□□ 0.81
SMG1-203ENST00000532700 TEKT3Q9BXF9 490 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 ERVK-5Q9HDB9 667 aa20.12■□□□□ 0.81
SMG1-203ENST00000532700 PLXNA4Q9HCM2 1894 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 ADGRA3Q8IWK6 1321 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 EML1O00423 815 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 OATP04181 439 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 SKIV2LQ15477 1246 aaKnown RBP20.11■□□□□ 0.81
SMG1-203ENST00000532700 LETM2Q2VYF4 491 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 CPLX2Q6PUV4 134 aaKnown RBP20.11■□□□□ 0.81
SMG1-203ENST00000532700 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 ATXN2LQ8WWM7 1075 aaKnown RBP20.11■□□□□ 0.81
SMG1-203ENST00000532700 TNFRSF25Q93038 417 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 CEP89Q96ST8 783 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 OSMRQ99650 979 aa20.11■□□□□ 0.81
SMG1-203ENST00000532700 ORC3Q9UBD5 711 aaPredicted RBP20.11■□□□□ 0.81
SMG1-203ENST00000532700 MUC3AQ02505 3323 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 DGKIO75912 1065 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 IBSPP21815 317 aaPredicted RBP20.1■□□□□ 0.81
SMG1-203ENST00000532700 NEK4P51957 841 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 PAK2Q13177 524 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 C8orf34Q49A92 452 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 PIK3AP1Q6ZUJ8 805 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 KRT25Q7Z3Z0 450 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 FAM228AQ86W67 206 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 METTL13Q8N6R0 699 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 KIF2CQ99661 725 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 TSPYL2Q9H2G4 693 aaPredicted RBP20.1■□□□□ 0.81
SMG1-203ENST00000532700 WRAP73Q9P2S5 460 aaPredicted RBP20.1■□□□□ 0.81
SMG1-203ENST00000532700 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 DDX25Q9UHL0 483 aaKnown RBP20.1■□□□□ 0.81
SMG1-203ENST00000532700 VAV3Q9UKW4 847 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 SQORQ9Y6N5 450 aa20.1■□□□□ 0.81
SMG1-203ENST00000532700 M0QZ92 97 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 CDKL5O76039 1030 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 MRPS5P82675 430 aaKnown RBP20.09■□□□□ 0.81
SMG1-203ENST00000532700 TARBP2Q15633 366 aaKnown RBP20.09■□□□□ 0.81
SMG1-203ENST00000532700 GALNT17Q6IS24 598 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 MIER3Q7Z3K6 550 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 POTEDQ86YR6 584 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 NME8Q8N427 588 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 BANK1Q8NDB2 785 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 HAS1Q92839 578 aa20.09■□□□□ 0.81
SMG1-203ENST00000532700 KCNMB3Q9NPA1 279 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms